Gene
RNA
| Item | Value |
|---|---|
| gene id | G219503 |
| gene name | LOC106585489 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 5688673 ~ 5689762 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| sodium bicarbonate cotransporter 3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU250381 | True | 345 | lncRNA | 0.54 | 2 | 5688673 | 5689762 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513540 | LOC106585541 | coding | downstream | 98527 | 5557994 ~ 5590146 (-) |
| LOC110517595 | LOC106585541 | coding | downstream | 196150 | 5457526 ~ 5492523 (-) |
| LOC110535504 | LOC106574737 | coding | downstream | 248770 | 5376122 ~ 5439903 (-) |
| LOC110535340 | LOC106574784 | coding | downstream | 333137 | 5352140 ~ 5355536 (-) |
| LOC110515205 | ci023 | coding | downstream | 353099 | 5333873 ~ 5335574 (-) |
| LOC110533792 | LOC106605966 | coding | upstream | 33920 | 5723682 ~ 5725550 (-) |
| LOC110535565 | LOC106606103 | coding | upstream | 65298 | 5755060 ~ 5766123 (-) |
| LOC110535576 | LOC106586326 | coding | upstream | 89058 | 5778820 ~ 5790359 (-) |
| LOC110535585 | LOC106586334 | coding | upstream | 100705 | 5790467 ~ 5797248 (-) |
| LOC110490516 | LOC106574265 | coding | upstream | 107156 | 5796918 ~ 5799016 (-) |
| G219552 | NA | non-coding | downstream | 3357 | 5684955 ~ 5685316 (-) |
| G219550 | LOC106585489 | non-coding | downstream | 5891 | 5680205 ~ 5682782 (-) |
| G219543 | NA | non-coding | downstream | 8916 | 5669425 ~ 5679757 (-) |
| G219541 | NA | non-coding | downstream | 24702 | 5663577 ~ 5663971 (-) |
| G219501 | LOC106606078 | non-coding | downstream | 61153 | 5535168 ~ 5627520 (-) |
| G219559 | NA | non-coding | upstream | 16467 | 5706229 ~ 5707402 (-) |
| G219562 | NA | non-coding | upstream | 18639 | 5708401 ~ 5708629 (-) |
| G219563 | NA | non-coding | upstream | 21523 | 5711285 ~ 5711547 (-) |
| G219564 | NA | non-coding | upstream | 23016 | 5712778 ~ 5713205 (-) |
| G219565 | NA | non-coding | upstream | 25760 | 5715522 ~ 5715742 (-) |
| G219500 | NA | other | downstream | 382 | 5687725 ~ 5688291 (-) |
| G219290 | LOC106593286 | other | downstream | 679267 | 5008084 ~ 5009406 (-) |
| G219200 | NA | other | downstream | 916622 | 4770350 ~ 4772051 (-) |
| LOC118944839 | LOC106573494 | other | downstream | 1039870 | 4634932 ~ 4648920 (-) |
| LOC118944829 | LOC106606066 | other | downstream | 1148232 | 4535483 ~ 4553394 (-) |
| G219591 | NA | other | upstream | 58396 | 5748158 ~ 5748714 (-) |
| G219592 | NA | other | upstream | 61962 | 5751724 ~ 5752094 (-) |
| LOC110534138 | LOC106605946 | other | upstream | 639840 | 6329602 ~ 6349701 (-) |
| G219820 | LOC106605946 | other | upstream | 643206 | 6332968 ~ 6338813 (-) |
| LOC110507902 | LOC106593870 | other | upstream | 796738 | 6479543 ~ 6491729 (-) |
