G218544


Basic Information

Item Value
gene id G218544
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 5708877 ~ 5709087 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU249122
agtgctgtagtggagcaggttgagagcttcaagttccttggtgtccacatcaacaacaaactagaatggtcctagcacaccaagacagtagtgaagagggcacaacaaagcctattcaccctcaggaaactaaagagatttggcatgggtcctgagatcctcaaaaggttctacagctgcaacatcaagagcatggttgcatcactgcctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249122 True 211 lncRNA 0.46 1 5708877 5709087

Neighbor

gene id symbol gene type direction distance location
LOC110534121 slc4a7 coding upstream 2732 5637262 ~ 5706145 (+)
LOC110535491 LOC106606078 coding upstream 81441 5533015 ~ 5627436 (+)
LOC118936615 LOC106585480 coding upstream 96755 5605777 ~ 5612122 (+)
LOC110493157 LOC106585480 coding upstream 171754 5504091 ~ 5537123 (+)
LOC110535554 LOC106605965 coding downstream 20830 5729917 ~ 5733058 (+)
cklf7 cklf7 coding downstream 26719 5735806 ~ 5744817 (+)
trnat-ugu-30 NA coding downstream 91790 5800877 ~ 5800949 (+)
LOC110508149 LOC106593364 coding downstream 113304 5822391 ~ 5898142 (+)
LOC110508220 sc61b coding downstream 248170 5957257 ~ 5963980 (+)
G218507 NA non-coding upstream 848 5706326 ~ 5708029 (+)
G218539 NA non-coding upstream 14382 5693336 ~ 5694495 (+)
G218540 NA non-coding upstream 14537 5694010 ~ 5694340 (+)
G218538 NA non-coding upstream 15808 5691906 ~ 5693069 (+)
G218537 NA non-coding upstream 16007 5691176 ~ 5692870 (+)
G218547 NA non-coding downstream 6562 5715649 ~ 5715874 (+)
G218551 NA non-coding downstream 17988 5727075 ~ 5727534 (+)
G218553 NA non-coding downstream 19351 5728438 ~ 5728739 (+)
G218530 NA non-coding downstream 25696 5734783 ~ 5735316 (+)
G218559 NA non-coding downstream 41343 5750430 ~ 5750652 (+)
G218487 NA other upstream 75396 5543930 ~ 5633481 (+)
G218465 NA other upstream 147606 5460092 ~ 5561271 (+)
G218301 NA other upstream 382868 5325427 ~ 5326009 (+)
LOC110507709 LOC106574077 other upstream 687004 5018589 ~ 5026840 (+)
G218558 NA other downstream 39138 5748225 ~ 5748742 (+)
LOC110535756 stx17 other downstream 420243 6129251 ~ 6157940 (+)
LOC110534148 invs other downstream 498416 6174662 ~ 6228920 (+)

Expression


Co-expression Network