G219588



Basic Information


Item Value
gene id G219588
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 5746436 ~ 5747033 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU250490
AAAGTgtacaaccctttccacagagggttctacatgtaacccaaaagagttctacctggaaccaaaaggggtcctcctatggggacagctgcagAACCCCTTTTCTAAGAGTGTGTACTTTAAAGTGAATTCCCTTGCATCCACCAGGAATAGTGAGGAGGAGGTACTAATCAGTATTTCCCTGTGTTTAGGCCATGTCCCACCCGGCAACACAGGAATGTCTTGGACCTTTCCCAGGTCATTAATGGAAGTGTATGGACATTTTCAGATGGGGATTTTGTACACTTGAATAGGGGAAGGGGCATTGGTTATagatacactactgttcaaaagtttgtggtcacttagaaatgcccttgtttttgaaagaaaagccccttttattgtccattaaaatctcatcacattgatcagaaatacagtgcagacattgttaatgttgtaaatgactattgtagctggaaacggctgatttttaatggaatatagGCTTACAGTGACCCATTATGAGCAACCATCACTTTATGTTCCattggcacattgtgttagctaatccaaggttatcattttaaaaggctaattgatcattagaaaaccc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU250490 True 598 lncRNA 0.40 1 5746436 5747033

Neighbor


gene id symbol gene type direction distance location
LOC110533792 LOC106605966 coding downstream 20886 5723682 ~ 5725550 (-)
LOC110513540 LOC106585541 coding downstream 156290 5557994 ~ 5590146 (-)
LOC110517595 LOC106585541 coding downstream 253913 5457526 ~ 5492523 (-)
LOC110535504 LOC106574737 coding downstream 306533 5376122 ~ 5439903 (-)
LOC110535340 LOC106574784 coding downstream 390900 5352140 ~ 5355536 (-)
LOC110535565 LOC106606103 coding upstream 8027 5755060 ~ 5766123 (-)
LOC110535576 LOC106586326 coding upstream 31787 5778820 ~ 5790359 (-)
LOC110535585 LOC106586334 coding upstream 43434 5790467 ~ 5797248 (-)
LOC110490516 LOC106574265 coding upstream 49885 5796918 ~ 5799016 (-)
LOC110490524 LOC106574865 coding upstream 54148 5801181 ~ 5806960 (-)
G219571 NA non-coding downstream 18607 5727579 ~ 5727829 (-)
G219570 NA non-coding downstream 19801 5726428 ~ 5726635 (-)
G219566 NA non-coding downstream 30019 5715996 ~ 5716417 (-)
G219565 NA non-coding downstream 30694 5715522 ~ 5715742 (-)
G219564 NA non-coding downstream 33231 5712778 ~ 5713205 (-)
G219589 NA non-coding upstream 258 5747291 ~ 5747612 (-)
G219590 NA non-coding upstream 582 5747615 ~ 5747847 (-)
G219574 NA non-coding upstream 6293 5753326 ~ 5754410 (-)
G219593 NA non-coding upstream 19241 5766274 ~ 5766509 (-)
G219500 NA other downstream 58145 5687725 ~ 5688291 (-)
G219290 LOC106593286 other downstream 737030 5008084 ~ 5009406 (-)
G219200 NA other downstream 974385 4770350 ~ 4772051 (-)
LOC118944839 LOC106573494 other downstream 1097633 4634932 ~ 4648920 (-)
LOC118944829 LOC106606066 other downstream 1205995 4535483 ~ 4553394 (-)
G219591 NA other upstream 1125 5748158 ~ 5748714 (-)
G219592 NA other upstream 4691 5751724 ~ 5752094 (-)
LOC110534138 LOC106605946 other upstream 582569 6329602 ~ 6349701 (-)
G219820 LOC106605946 other upstream 585935 6332968 ~ 6338813 (-)
LOC110507902 LOC106593870 other upstream 739467 6479543 ~ 6491729 (-)

Expression



Co-expression Network