G218558


Basic Information

Item Value
gene id G218558
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 5748225 ~ 5748742 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU249136
ggtaatcttcatcataggtacacttcaactatgacagacaaaataagggaaaaaaatccagaaaatcacattgtaggattttttatgaatttaattagcaaattatggtggaaaataagtatttggtcaataacaaaagtttatctcaatactttgttatataccctttgttggcaatgacagaggtgaagacttacagaaaatgtttgacaaggttttcacacactgttgctggtattttggcccattcctccatgcagatctcctctagagcagtgatgttttggggctgttgctgggcaacatggactttcaactccctccaaagattttctatgggattgagatctggagactggctgggccactccaggaccttgaaatgcttcttacgaagccactccttcgttgcccgggcggtgtgtttgggatcattgtcatgctgaaagacccagccacgctTCATCCTtaatctatatctatctatagatatctatctatatctatctatatatata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249136 True 518 TUCP 0.42 1 5748225 5748742

Neighbor

gene id symbol gene type direction distance location
cklf7 cklf7 coding upstream 3408 5735806 ~ 5744817 (+)
LOC110535554 LOC106605965 coding upstream 15167 5729917 ~ 5733058 (+)
LOC110534121 slc4a7 coding upstream 42080 5637262 ~ 5706145 (+)
LOC110535491 LOC106606078 coding upstream 120789 5533015 ~ 5627436 (+)
LOC118936615 LOC106585480 coding upstream 136103 5605777 ~ 5612122 (+)
trnat-ugu-30 NA coding downstream 52135 5800877 ~ 5800949 (+)
LOC110508149 LOC106593364 coding downstream 73649 5822391 ~ 5898142 (+)
LOC110508220 sc61b coding downstream 208515 5957257 ~ 5963980 (+)
LOC110534158 nr4a3 coding downstream 339763 6088505 ~ 6124399 (+)
LOC110535756 stx17 coding downstream 380509 6129251 ~ 6157940 (+)
G218530 NA non-coding upstream 12909 5734783 ~ 5735316 (+)
G218553 NA non-coding upstream 19486 5728438 ~ 5728739 (+)
G218551 NA non-coding upstream 20691 5727075 ~ 5727534 (+)
G218547 NA non-coding upstream 32351 5715649 ~ 5715874 (+)
G218544 NA non-coding upstream 39138 5708877 ~ 5709087 (+)
G218559 NA non-coding downstream 1688 5750430 ~ 5750652 (+)
G218528 NA non-coding downstream 4586 5753328 ~ 5754411 (+)
G218561 NA non-coding downstream 6304 5755046 ~ 5756568 (+)
G218562 NA non-coding downstream 8628 5757370 ~ 5758235 (+)
G218563 NA non-coding downstream 10751 5759493 ~ 5759798 (+)
G218487 NA other upstream 114744 5543930 ~ 5633481 (+)
G218465 NA other upstream 186954 5460092 ~ 5561271 (+)
G218301 NA other upstream 422216 5325427 ~ 5326009 (+)
LOC110507709 LOC106574077 other upstream 726352 5018589 ~ 5026840 (+)
LOC110534148 invs other downstream 458761 6174662 ~ 6228920 (+)
LOC110535707 LOC106574428 other downstream 499336 6248078 ~ 6254241 (+)

Expression


Co-expression Network