G219627



Basic Information


Item Value
gene id G219627
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 5833701 ~ 5833980 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU250532
gaagaagaaggatgagtacaaccccaagaacaccatcccaaccttgaagcatggaggtggaaacatcattctttggggatgcggggaggatggatggggccatgtatcgcgagatcttggccaacaacctccttccctcagtaagagcattgaagatgggtcgtagctgggtcttccagcatgacaacgacccgaaacacacagccagggcaactaaggagtggctccgtaagaagcatctc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU250532 True 242 lncRNA 0.52 2 5833701 5833980

Neighbor


gene id symbol gene type direction distance location
LOC110490524 LOC106574865 coding downstream 26741 5801181 ~ 5806960 (-)
LOC110490516 LOC106574265 coding downstream 34685 5796918 ~ 5799016 (-)
LOC110535585 LOC106586334 coding downstream 36453 5790467 ~ 5797248 (-)
LOC110535576 LOC106586326 coding downstream 43342 5778820 ~ 5790359 (-)
LOC110535565 LOC106606103 coding downstream 67578 5755060 ~ 5766123 (-)
LOC118944866 NA coding upstream 62285 5837102 ~ 5898231 (-)
LOC110508150 tmem245 coding upstream 74191 5908171 ~ 5925671 (-)
LOC110508233 NA coding upstream 79098 5913078 ~ 5917801 (-)
LOC110508167 LOC106606061 coding upstream 93319 5927299 ~ 5932957 (-)
LOC110520778 LOC106606060 coding upstream 117577 5951557 ~ 5957032 (-)
G219593 NA non-coding downstream 67192 5766274 ~ 5766509 (-)
G219574 NA non-coding downstream 79291 5753326 ~ 5754410 (-)
G219590 NA non-coding downstream 85854 5747615 ~ 5747847 (-)
G219589 NA non-coding downstream 86089 5747291 ~ 5747612 (-)
G219630 NA non-coding upstream 3912 5837892 ~ 5838778 (-)
G219680 NA non-coding upstream 142899 5976879 ~ 5981909 (-)
G219698 NA non-coding upstream 184342 6018322 ~ 6021156 (-)
G219700 NA non-coding upstream 189477 6023457 ~ 6023702 (-)
G219592 NA other downstream 81607 5751724 ~ 5752094 (-)
G219591 NA other downstream 84987 5748158 ~ 5748714 (-)
G219500 NA other downstream 145410 5687725 ~ 5688291 (-)
G219290 LOC106593286 other downstream 824295 5008084 ~ 5009406 (-)
G219200 NA other downstream 1061650 4770350 ~ 4772051 (-)
LOC110534138 LOC106605946 other upstream 495622 6329602 ~ 6349701 (-)
G219820 LOC106605946 other upstream 498988 6332968 ~ 6338813 (-)
LOC110507902 LOC106593870 other upstream 652520 6479543 ~ 6491729 (-)
LOC110508304 gtpbp10 other upstream 1096011 6929457 ~ 6932661 (-)
LOC118964351 LOC106605995 other upstream 1114818 6948445 ~ 6952369 (-)

Expression



Co-expression Network