G218653


Basic Information

Item Value
gene id G218653
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 5949998 ~ 5950197 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU249268
TGAATATCAATGTAGATTTGCTTTGTTTAAACAATCTATCAATGACACTCTACAGGCCTACAGCGTTCTCTCTTCTCTGCATTAACCCTTTACACTGACGAGGACATTACTCATCCCAACAAGGGACGTTTGGAGGACAGAGTTACCAGAACTACCAACAtcctagaccagtggttcctaACGTCTTTaccttactgtac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249268 True 200 lncRNA 0.56 1 5949998 5950197

Neighbor

gene id symbol gene type direction distance location
LOC110508149 LOC106593364 coding upstream 54465 5822391 ~ 5898142 (+)
trnat-ugu-30 NA coding upstream 149049 5800877 ~ 5800949 (+)
cklf7 cklf7 coding upstream 205181 5735806 ~ 5744817 (+)
LOC110535554 LOC106605965 coding upstream 216940 5729917 ~ 5733058 (+)
LOC110534121 slc4a7 coding upstream 243853 5637262 ~ 5706145 (+)
LOC110508220 sc61b coding downstream 7060 5957257 ~ 5963980 (+)
LOC110534158 nr4a3 coding downstream 138308 6088505 ~ 6124399 (+)
LOC110535756 stx17 coding downstream 179054 6129251 ~ 6157940 (+)
LOC110534148 invs coding downstream 224465 6174662 ~ 6228920 (+)
LOC110535707 LOC106574428 coding downstream 298072 6248078 ~ 6254241 (+)
G218652 NA non-coding upstream 5978 5943756 ~ 5944020 (+)
G218650 NA non-coding upstream 9660 5940114 ~ 5940338 (+)
G218601 LOC106606061 non-coding upstream 18967 5927315 ~ 5931031 (+)
G218632 NA non-coding upstream 86536 5861340 ~ 5863462 (+)
G218663 NA non-coding downstream 26666 5976863 ~ 5981808 (+)
G218664 NA non-coding downstream 26766 5976963 ~ 5981969 (+)
G218668 NA non-coding downstream 32927 5983124 ~ 5986985 (+)
G218678 NA non-coding downstream 65820 6016017 ~ 6016296 (+)
G218681 NA non-coding downstream 74082 6024279 ~ 6024572 (+)
G218558 NA other upstream 201256 5748225 ~ 5748742 (+)
G218487 NA other upstream 316517 5543930 ~ 5633481 (+)
LOC110535491 LOC106606078 other upstream 323420 5533015 ~ 5627436 (+)
G218465 NA other upstream 388727 5460092 ~ 5561271 (+)
LOC110534143 tmem67 other downstream 309740 6259904 ~ 6277154 (+)

Expression


Co-expression Network