G219680


Basic Information

Item Value
gene id G219680
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 5976879 ~ 5981909 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU250590
gaaacacacgtaggctcagatggacaggcagattccgacaggacaggacaaggttgcagcaaacacgacgatagtctggttcaggcatgagtaacacaaacgagaatccgacaaagacagaagcagaaagagagagagatatagagacctaatcagagggaaaaagggaacaggtgggaaaaggggtgaacgaggtagtcagagaagacaagggacagctgggggaaagaggggaagaaaaggtaacctagtacgaccagcagagggagacagggtgaagagaaaggacagaaacaagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250590 True 300 lncRNA 0.31 2 5976879 5981909

Neighbor

gene id symbol gene type direction distance location
LOC110520778 LOC106606060 coding downstream 19847 5951557 ~ 5957032 (-)
LOC110508167 LOC106606061 coding downstream 43922 5927299 ~ 5932957 (-)
LOC110508150 tmem245 coding downstream 51208 5908171 ~ 5925671 (-)
LOC110508233 NA coding downstream 59078 5913078 ~ 5917801 (-)
LOC118944866 NA coding downstream 78648 5837102 ~ 5898231 (-)
LOC110535692 LOC106593159 coding upstream 176121 6158030 ~ 6173396 (-)
trnat-cgu-2 NA coding upstream 241888 6223797 ~ 6223869 (-)
LOC110535643 tex10 coding upstream 247003 6228912 ~ 6259816 (-)
LOC110535663 cdh17 coding upstream 318088 6299997 ~ 6325652 (-)
LOC118936454 LOC106605946 coding upstream 346185 6328094 ~ 6332714 (-)
G219630 NA non-coding downstream 138101 5837892 ~ 5838778 (-)
G219627 NA non-coding downstream 142899 5833701 ~ 5833980 (-)
LOC110490524 LOC106574865 non-coding downstream 172762 5801181 ~ 5806960 (-)
G219593 NA non-coding downstream 210370 5766274 ~ 5766509 (-)
G219698 NA non-coding upstream 36413 6018322 ~ 6021156 (-)
G219700 NA non-coding upstream 41548 6023457 ~ 6023702 (-)
G219671 NA non-coding upstream 42086 6023995 ~ 6024216 (-)
G219701 NA non-coding upstream 43570 6025479 ~ 6025829 (-)
G219670 NA non-coding upstream 53703 6035612 ~ 6081816 (-)
G219592 NA other downstream 224785 5751724 ~ 5752094 (-)
G219591 NA other downstream 228165 5748158 ~ 5748714 (-)
G219500 NA other downstream 288588 5687725 ~ 5688291 (-)
G219290 LOC106593286 other downstream 967473 5008084 ~ 5009406 (-)
G219200 NA other downstream 1204828 4770350 ~ 4772051 (-)
LOC110534138 LOC106605946 other upstream 347693 6329602 ~ 6349701 (-)
G219820 LOC106605946 other upstream 351059 6332968 ~ 6338813 (-)
LOC110507902 LOC106593870 other upstream 504591 6479543 ~ 6491729 (-)
LOC110508304 gtpbp10 other upstream 948082 6929457 ~ 6932661 (-)
LOC118964351 LOC106605995 other upstream 966889 6948445 ~ 6952369 (-)

Expression


Co-expression Network