G218664


Basic Information

Item Value
gene id G218664
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 5976963 ~ 5981969 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU249281
gtcccttgtcttctctgactacctcgttcaccccttttcccacctgttccctttttccctctgattaggtctctatatctctctctctttctgcttctgtctttgtcggattctcgtttgtgttactcatgcctgaaccagactatcgtcgtgtttgctgcaaccttgtcctgtcctatcggaatctgcctgttcatctaaccttgtcctgtcctgtcggaatctgcctgtccatctgagcctacgtgtgtttcatcattaaagaaactctgttttgttaattcgcttttgggtcctcattcacgcacctgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249281 True 314 lncRNA 0.46 2 5976963 5981969

Neighbor

gene id symbol gene type direction distance location
LOC110508220 sc61b coding upstream 12983 5957257 ~ 5963980 (+)
LOC110508149 LOC106593364 coding upstream 81430 5822391 ~ 5898142 (+)
trnat-ugu-30 NA coding upstream 176014 5800877 ~ 5800949 (+)
cklf7 cklf7 coding upstream 232146 5735806 ~ 5744817 (+)
LOC110535554 LOC106605965 coding upstream 243905 5729917 ~ 5733058 (+)
LOC110534158 nr4a3 coding downstream 106536 6088505 ~ 6124399 (+)
LOC110535756 stx17 coding downstream 147282 6129251 ~ 6157940 (+)
LOC110534148 invs coding downstream 192693 6174662 ~ 6228920 (+)
LOC110535707 LOC106574428 coding downstream 266300 6248078 ~ 6254241 (+)
LOC110534143 tmem67 coding downstream 277935 6259904 ~ 6277154 (+)
G218653 NA non-coding upstream 26766 5949998 ~ 5950197 (+)
G218652 NA non-coding upstream 32943 5943756 ~ 5944020 (+)
G218650 NA non-coding upstream 36625 5940114 ~ 5940338 (+)
G218601 LOC106606061 non-coding upstream 45932 5927315 ~ 5931031 (+)
G218668 NA non-coding downstream 1155 5983124 ~ 5986985 (+)
G218678 NA non-coding downstream 34048 6016017 ~ 6016296 (+)
G218681 NA non-coding downstream 42310 6024279 ~ 6024572 (+)
G218689 NA non-coding downstream 65481 6047450 ~ 6101346 (+)
G218558 NA other upstream 228221 5748225 ~ 5748742 (+)
G218487 NA other upstream 343482 5543930 ~ 5633481 (+)
LOC110535491 LOC106606078 other upstream 350385 5533015 ~ 5627436 (+)
G218842 LOC106605951 other downstream 468369 6450338 ~ 6455202 (+)

Expression


Co-expression Network