G218678


Basic Information

Item Value
gene id G218678
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 6016017 ~ 6016296 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU249300
CTCTAGTGTTATCTCTGTGGGGTTACTACTGTATTCCTGCCCTCTCTAGTGTTATCTCTGTGGGGTTACTACTGTATTCCTGCCTTCCCTCTCTAGTGTTATCTCTGTGGGGTTACTACTGTATTCCTGCCTTCCCTCTCTAGTGTTATCTCTGTGGGGTTACTACTGTATTCCTGCCCTCTCTAGTGTTATCTCTGTGGGATTACTACTGTATTCCTGCCTTCCCTCTCTAGTGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249300 True 237 lncRNA 0.43 2 6016017 6016296

Neighbor

gene id symbol gene type direction distance location
LOC110508220 sc61b coding upstream 52037 5957257 ~ 5963980 (+)
LOC110508149 LOC106593364 coding upstream 120484 5822391 ~ 5898142 (+)
trnat-ugu-30 NA coding upstream 215068 5800877 ~ 5800949 (+)
cklf7 cklf7 coding upstream 271200 5735806 ~ 5744817 (+)
LOC110535554 LOC106605965 coding upstream 282959 5729917 ~ 5733058 (+)
LOC110534158 nr4a3 coding downstream 72209 6088505 ~ 6124399 (+)
LOC110535756 stx17 coding downstream 112955 6129251 ~ 6157940 (+)
LOC110534148 invs coding downstream 158366 6174662 ~ 6228920 (+)
LOC110535707 LOC106574428 coding downstream 231973 6248078 ~ 6254241 (+)
LOC110534143 tmem67 coding downstream 243608 6259904 ~ 6277154 (+)
G218668 NA non-coding upstream 29032 5983124 ~ 5986985 (+)
G218664 NA non-coding upstream 34048 5976963 ~ 5981969 (+)
G218663 NA non-coding upstream 34209 5976863 ~ 5981808 (+)
G218653 NA non-coding upstream 65820 5949998 ~ 5950197 (+)
G218652 NA non-coding upstream 71997 5943756 ~ 5944020 (+)
G218681 NA non-coding downstream 7983 6024279 ~ 6024572 (+)
G218689 NA non-coding downstream 31154 6047450 ~ 6101346 (+)
G218759 NA non-coding downstream 164693 6180989 ~ 6181211 (+)
G218558 NA other upstream 267275 5748225 ~ 5748742 (+)
G218487 NA other upstream 382536 5543930 ~ 5633481 (+)
LOC110535491 LOC106606078 other upstream 389439 5533015 ~ 5627436 (+)
G218842 LOC106605951 other downstream 434042 6450338 ~ 6455202 (+)

Expression


Co-expression Network