G219698


Basic Information

Item Value
gene id G219698
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 6018322 ~ 6021156 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU250608
CTTATCCCCCACGGGTGCTGTGCCTATGAGTGTGTTATGCTTCTGTCAGTAGGGTCACATGTTGAGTCTAGTTTTGTCCCCAACCCCCCAATTATTATTAGACAAGGACAATGTCTAGTAATCAACATCTCAGCCAGTACAGAGATATATTGTAGTATCAGTGTCTGAGATAGCTAGCCAGATAGTTTTTGTTTTTAGTCCCTGGGCTGGTTAGAAAATACATACAtccttctctccactcctcactaCAGTAGCATAATGACTGAGTTGCTCCTAACTACAGTAACAAAATGACTGAGTTACTCctaactacagtaacataatgactgaGTTACGCATaaatacagtaacataatgactgagttactcgtaaatacagtaatataatgacTGAGTTActactaactacagtaacataaCGACTGAATTACTCctaactacagtaacataatgactgagttactcctaactacagtaacataatgactgaGTTACTCCGAACTACAGTAACAAAATGACTGAGTTACTCctaactacagtaacataatgactgaGTTACTCCTAActctacagtaacataatgactgagttactcgtaaatacagtaacataatgactgagttactactaactacagtaacataatgactgaATTACTCctaactacagtaacataatgactgaGTAACTCATaactacagtaacataatgactgagttactcctaactacagtaacataatGGCTGAGTTACTCATaactacagtaacataatgactgaGTTACTCCTAActctacagtaacataatgactgaGTTACTCCTAActctacagtaacataatgactgaGTTACTCCTAActctacagtaacataatgactgaGTTACTCCTAACTCTACAGTAACATAATGGCTGAGTTACTCCTAActctacagtaacataatgactgagttactcctaactacagtaacataatGGCTGAGTTACTCctaactacagtaacataatgactgagttaacctaactacagtaacataatgactgagttactcctaactacagtaacataatgactgagttaacctaactacagtaacataatgactgagttactcctaactacagtaacataatGGCTGAGTTACTCctaactacagtaacataatgactgagttactcctaactacagtaacataatgactgagttaacctaactacagtaacataatgactgagttactcctaactacagtaacataatgactgaATTACTCctaactacagtaacataatgactgagttaacctaactacagtaacataatgactgagttactcctaactacagtaacataatGGCTGAGTTACTCctaactacagtaacataatgactgaGTTACTCCTAActctacagtaacataatgactgagttaacctaactacagtaacataatgactgagttactcctaactacagtaacataatGGCTGAGTTACTCATAACTACAGAAACATAATGACTGAGTTACTCctaactacagtaacataatgactgaGTTACTCCTAActctacagtaacataatgactgagttaacctaactacagtaacataatgactgaGTTACTCCTAActctacagtaacataatgactgaGTTAACCTAACTACACTAACATCATGACTGAGTTGCTCATAACTACAGAAACATAATGACTGAGTTActcctaactacagtaacagcatgACTGAGTTACTCctaactacagtaacataatGGCTGAGTTACTCctaactacagtaacataatgactgaGTTACTCCTAACTACAGTAACGTCTTGACTGAGTTACTCATAACTACAGTAACGTCTTGACTGAGTTACTCATaactacagtaacataatgactgaGTTACGCGTaaatacagtaacataatgactgagttactcgtaaatacagtaacataatgactgaGTTACTCATAACTACAGTAACGTAATGACTGAGTTACTCctaactacagtaacataatgactgaGTTACTCATAACTACAGTAAATAATGGCTGAGTTActactaactacagtaacataatgactgaCTTAGTCCTAAccctacagtaacataatgactggGTTAGTCCTAACTCTACAGTAACATAGTGACCAGGAGagactgcctgttcaccccgctatcatccagaaggcgaggtcagtacaggtgcatcaaagctgggaccgagagactgaaaaacagcttctatatcaaggccatcagactgttaaacagccaccactaacattgagtggctgctgccaacacaccgactcaactccagccactttaataatgggaattgatgggaattgatgtaaaatatatcactagccactttcaacaatgctacttaatat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250608 True 2413 lncRNA 0.36 2 6018322 6021156

Neighbor

gene id symbol gene type direction distance location
LOC110520778 LOC106606060 coding downstream 61290 5951557 ~ 5957032 (-)
LOC110508167 LOC106606061 coding downstream 85365 5927299 ~ 5932957 (-)
LOC110508150 tmem245 coding downstream 92651 5908171 ~ 5925671 (-)
LOC110508233 NA coding downstream 100521 5913078 ~ 5917801 (-)
LOC118944866 NA coding downstream 120091 5837102 ~ 5898231 (-)
LOC110535692 LOC106593159 coding upstream 136874 6158030 ~ 6173396 (-)
trnat-cgu-2 NA coding upstream 202641 6223797 ~ 6223869 (-)
LOC110535643 tex10 coding upstream 207756 6228912 ~ 6259816 (-)
LOC110535663 cdh17 coding upstream 278841 6299997 ~ 6325652 (-)
LOC118936454 LOC106605946 coding upstream 306938 6328094 ~ 6332714 (-)
G219680 NA non-coding downstream 36413 5976879 ~ 5981909 (-)
G219630 NA non-coding downstream 179544 5837892 ~ 5838778 (-)
G219627 NA non-coding downstream 184342 5833701 ~ 5833980 (-)
LOC110490524 LOC106574865 non-coding downstream 214205 5801181 ~ 5806960 (-)
G219700 NA non-coding upstream 2301 6023457 ~ 6023702 (-)
G219671 NA non-coding upstream 2839 6023995 ~ 6024216 (-)
G219701 NA non-coding upstream 4323 6025479 ~ 6025829 (-)
G219670 NA non-coding upstream 14456 6035612 ~ 6081816 (-)
G219668 NA non-coding upstream 64014 6085170 ~ 6086149 (-)
G219592 NA other downstream 266228 5751724 ~ 5752094 (-)
G219591 NA other downstream 269608 5748158 ~ 5748714 (-)
G219500 NA other downstream 330031 5687725 ~ 5688291 (-)
G219290 LOC106593286 other downstream 1008916 5008084 ~ 5009406 (-)
G219200 NA other downstream 1246271 4770350 ~ 4772051 (-)
LOC110534138 LOC106605946 other upstream 308446 6329602 ~ 6349701 (-)
G219820 LOC106605946 other upstream 311812 6332968 ~ 6338813 (-)
LOC110507902 LOC106593870 other upstream 465344 6479543 ~ 6491729 (-)
LOC110508304 gtpbp10 other upstream 908835 6929457 ~ 6932661 (-)
LOC118964351 LOC106605995 other upstream 927642 6948445 ~ 6952369 (-)

Expression


Co-expression Network