G219700



Basic Information


Item Value
gene id G219700
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 6023457 ~ 6023702 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU250610
ATGTATGACTACACTACAGATAATCAGAACTAATACAGCATTATTACAGGGTTTATTCAATGATGTCACACAGTACACTATATCATGTCTATTGGTTAATTCATGCAGAGGAAATATTTGAATGATGTACTAATTATGCTCCTTGTTCCACCCACTGATTGGTGGAATTATTCTGTAAGCCTAAATTGCATTAAAACCAATTAATCAAAGCAGTGTTGTTTCAGCCGTTTTCCGTccatttatttg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU250610 True 246 lncRNA 0.39 1 6023457 6023702

Neighbor


gene id symbol gene type direction distance location
LOC110520778 LOC106606060 coding downstream 66425 5951557 ~ 5957032 (-)
LOC110508167 LOC106606061 coding downstream 90500 5927299 ~ 5932957 (-)
LOC110508150 tmem245 coding downstream 97786 5908171 ~ 5925671 (-)
LOC110508233 NA coding downstream 105656 5913078 ~ 5917801 (-)
LOC118944866 NA coding downstream 125226 5837102 ~ 5898231 (-)
LOC110535692 LOC106593159 coding upstream 134328 6158030 ~ 6173396 (-)
trnat-cgu-2 NA coding upstream 200095 6223797 ~ 6223869 (-)
LOC110535643 tex10 coding upstream 205210 6228912 ~ 6259816 (-)
LOC110535663 cdh17 coding upstream 276295 6299997 ~ 6325652 (-)
LOC118936454 LOC106605946 coding upstream 304392 6328094 ~ 6332714 (-)
G219698 NA non-coding downstream 2301 6018322 ~ 6021156 (-)
G219680 NA non-coding downstream 41548 5976879 ~ 5981909 (-)
G219630 NA non-coding downstream 184679 5837892 ~ 5838778 (-)
G219627 NA non-coding downstream 189477 5833701 ~ 5833980 (-)
G219671 NA non-coding upstream 293 6023995 ~ 6024216 (-)
G219701 NA non-coding upstream 1777 6025479 ~ 6025829 (-)
G219670 NA non-coding upstream 11910 6035612 ~ 6081816 (-)
G219668 NA non-coding upstream 61468 6085170 ~ 6086149 (-)
G219729 NA non-coding upstream 75743 6099445 ~ 6124753 (-)
G219592 NA other downstream 271363 5751724 ~ 5752094 (-)
G219591 NA other downstream 274743 5748158 ~ 5748714 (-)
G219500 NA other downstream 335166 5687725 ~ 5688291 (-)
G219290 LOC106593286 other downstream 1014051 5008084 ~ 5009406 (-)
G219200 NA other downstream 1251406 4770350 ~ 4772051 (-)
LOC110534138 LOC106605946 other upstream 305900 6329602 ~ 6349701 (-)
G219820 LOC106605946 other upstream 309266 6332968 ~ 6338813 (-)
LOC110507902 LOC106593870 other upstream 462798 6479543 ~ 6491729 (-)
LOC110508304 gtpbp10 other upstream 906289 6929457 ~ 6932661 (-)
LOC118964351 LOC106605995 other upstream 925096 6948445 ~ 6952369 (-)

Expression



Co-expression Network