G218681


Basic Information

Item Value
gene id G218681
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 6024279 ~ 6024572 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU249303
aagagaaagagacagagagagagacagagaaagagacagagacaaagagagagagagagatagagagagagagagagaacaaaaagataattacttgacacattggaaataattaacagaaaaactgagcaaactagaatactatttggccctaaacagagagtacacagtggcagaatacctgaccactgtgactgccccaaacttaaggaaaactttgactatgtacagacttagtgagcatagccttgctattgagaaaggccgccgtagacagacatggctctcaagaga

Function

NR:

description
PREDICTED: uncharacterized protein LOC104955046

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249303 True 294 lncRNA 0.41 1 6024279 6024572

Neighbor

gene id symbol gene type direction distance location
LOC110508220 sc61b coding upstream 60299 5957257 ~ 5963980 (+)
LOC110508149 LOC106593364 coding upstream 128746 5822391 ~ 5898142 (+)
trnat-ugu-30 NA coding upstream 223330 5800877 ~ 5800949 (+)
cklf7 cklf7 coding upstream 279462 5735806 ~ 5744817 (+)
LOC110535554 LOC106605965 coding upstream 291221 5729917 ~ 5733058 (+)
LOC110534158 nr4a3 coding downstream 63933 6088505 ~ 6124399 (+)
LOC110535756 stx17 coding downstream 104679 6129251 ~ 6157940 (+)
LOC110534148 invs coding downstream 150090 6174662 ~ 6228920 (+)
LOC110535707 LOC106574428 coding downstream 223697 6248078 ~ 6254241 (+)
LOC110534143 tmem67 coding downstream 235332 6259904 ~ 6277154 (+)
G218678 NA non-coding upstream 7983 6016017 ~ 6016296 (+)
G218668 NA non-coding upstream 37294 5983124 ~ 5986985 (+)
G218664 NA non-coding upstream 42310 5976963 ~ 5981969 (+)
G218663 NA non-coding upstream 42471 5976863 ~ 5981808 (+)
G218653 NA non-coding upstream 74082 5949998 ~ 5950197 (+)
G218689 NA non-coding downstream 22878 6047450 ~ 6101346 (+)
G218759 NA non-coding downstream 156417 6180989 ~ 6181211 (+)
G218763 NA non-coding downstream 161732 6186304 ~ 6188327 (+)
G218558 NA other upstream 275537 5748225 ~ 5748742 (+)
G218487 NA other upstream 390798 5543930 ~ 5633481 (+)
LOC110535491 LOC106606078 other upstream 397701 5533015 ~ 5627436 (+)
G218842 LOC106605951 other downstream 425766 6450338 ~ 6455202 (+)

Expression


Co-expression Network