G218689


Basic Information

Item Value
gene id G218689
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 6047450 ~ 6101346 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU249311
agagaaagagagagagagaaagagagagagagaaacaggacagTAGGAAGACAATTGGATAACAACATATTCACCAAAACACAGAGAGCTAGATCATTCACCCAATCCCACAGCCTGGTGCTCGTAACACTGAGCATAAGTACAGTAACTGTTCAAACTTCTCCCTTGAAAAAGTTTAATGGAACTTCTCGGTTTAAATAAAGCTGAAATGAAAAGGCTGTAACTAATAATGTTTTAGAGCAATAAAAATACATGTGGTTTGTTAAGAATTCATTTCTCCACTATTATACAGTTTCCGTTCGGTCTCTTATAACAGTTATCTCACGTCATATATaacacatcccacacacacacacactcatctcagTACCTTATGTCATGGTTCAGGAGCCTGCTTTTAGTCATAGGGCTTATTTCACTTCTTGGATGTGTGTGTAGAATGAAATATTTCTCATCCAATACAAGATCTAATGTCCATCCCATTTCATCCTGTCATCCAATACAAGATCTAATGTCCATCCCATTTCATCCTGTCATCCAATACAAGATCTAATGTCCATCCCATTTCATCCTGTCATCCAATACAAGATCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249311 True 592 lncRNA 0.38 2 6047450 6101346

Neighbor

gene id symbol gene type direction distance location
LOC110508220 sc61b coding upstream 83470 5957257 ~ 5963980 (+)
LOC110508149 LOC106593364 coding upstream 151917 5822391 ~ 5898142 (+)
trnat-ugu-30 NA coding upstream 246501 5800877 ~ 5800949 (+)
cklf7 cklf7 coding upstream 302633 5735806 ~ 5744817 (+)
LOC110535554 LOC106605965 coding upstream 314392 5729917 ~ 5733058 (+)
LOC110535756 stx17 coding downstream 27905 6129251 ~ 6157940 (+)
LOC110534148 invs coding downstream 73316 6174662 ~ 6228920 (+)
LOC110535707 LOC106574428 coding downstream 146923 6248078 ~ 6254241 (+)
LOC110534143 tmem67 coding downstream 158558 6259904 ~ 6277154 (+)
LOC110535685 LOC106606054 coding downstream 176128 6277474 ~ 6290170 (+)
G218681 NA non-coding upstream 22878 6024279 ~ 6024572 (+)
G218678 NA non-coding upstream 31154 6016017 ~ 6016296 (+)
G218668 NA non-coding upstream 60465 5983124 ~ 5986985 (+)
G218664 NA non-coding upstream 65481 5976963 ~ 5981969 (+)
G218663 NA non-coding upstream 65642 5976863 ~ 5981808 (+)
G218759 NA non-coding downstream 79643 6180989 ~ 6181211 (+)
G218763 NA non-coding downstream 84958 6186304 ~ 6188327 (+)
G218766 NA non-coding downstream 92393 6193739 ~ 6194610 (+)
G218769 NA non-coding downstream 99581 6200927 ~ 6201398 (+)
G218558 NA other upstream 298708 5748225 ~ 5748742 (+)
G218487 NA other upstream 413969 5543930 ~ 5633481 (+)
LOC110535491 LOC106606078 other upstream 420872 5533015 ~ 5627436 (+)
G218842 LOC106605951 other downstream 348992 6450338 ~ 6455202 (+)

Expression


Co-expression Network