G219668


Basic Information

Item Value
gene id G219668
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 6085170 ~ 6086149 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU250577
GAGGCTAACCCTTTTCCGGCAGGTTTGTGAAAGTGAAGGCTTGTGAGTTTCTGTAGCCTACAGCGCTAGTTAGCTTTCAGCTAACATAAACTAGGCTACGTATGAAGGCAAAATCCGTTGTATTGGGGATACAATTTATGTAAACCTCAAACGGAGTAAACTGGAATAACACGCAATTTAAGCAAGCTTCACATGTGGACTAAAAAACAACCGCAATTATTAACATGACGATGGAATAGAACTGCCCTCATTTGGCAAGGCTTCGGAGCGCAGAGGTGGAGATCGCAGGGGAATCCCCCTCTCTCGGCTTGAAATCCCTCTAACACAAGTACCCGAGCGCGCGCTGGACCCAGTGAACCTGTGTGATCCGACGCGCGTGCGCGGGGATAGCCTGTTCGGGtttggcctacaccggccaaacccgaacgatgcagggccaattgtgcgctgccctatgggactcccaatcacggccggttgtgatacagcctggattctaaccagggtgtctgtaatgatgcctcaagcactgagatgcagtgccttagaccgctgcccacTCGGAGCCCCATATAAAAAGGACTTAATGGTTGACTATCTGTGAATGTATCTAATaataacacatactgtacctACTGACCCACACACTGACTTGCTCCTCTAAAGCAACGTTTCCAATAAAGCATGCAGCATCAgaccccttgctctgagaccatCTGCATGTTGCAGAATGAAGACAGAACACTGAGCTAAATAATTCCTGTTGCTGCATCCATAGGGCCACTCAATGAGGTAGGCTATGCAATGCTCTGACCTGGGCATTTTAGACCAGCCATAGGTCTACACTTGTATGCCACAATTATAGTCTCAACACAGTCTCTAAACATGTGAAGGCAGTGTTTATTTTAGCCAAAACGTAGACCACATATTCATTATTTAGACAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250577 True 944 lncRNA 0.41 2 6085170 6086149

Neighbor

gene id symbol gene type direction distance location
LOC110520778 LOC106606060 coding downstream 128138 5951557 ~ 5957032 (-)
LOC110508167 LOC106606061 coding downstream 152213 5927299 ~ 5932957 (-)
LOC110508150 tmem245 coding downstream 159499 5908171 ~ 5925671 (-)
LOC110508233 NA coding downstream 167369 5913078 ~ 5917801 (-)
LOC118944866 NA coding downstream 186939 5837102 ~ 5898231 (-)
LOC110535692 LOC106593159 coding upstream 71881 6158030 ~ 6173396 (-)
trnat-cgu-2 NA coding upstream 137648 6223797 ~ 6223869 (-)
LOC110535643 tex10 coding upstream 142763 6228912 ~ 6259816 (-)
LOC110535663 cdh17 coding upstream 213848 6299997 ~ 6325652 (-)
LOC118936454 LOC106605946 coding upstream 241945 6328094 ~ 6332714 (-)
G219670 NA non-coding downstream 3354 6035612 ~ 6081816 (-)
G219701 NA non-coding downstream 59341 6025479 ~ 6025829 (-)
G219671 NA non-coding downstream 60954 6023995 ~ 6024216 (-)
G219700 NA non-coding downstream 61468 6023457 ~ 6023702 (-)
G219698 NA non-coding downstream 64014 6018322 ~ 6021156 (-)
G219729 NA non-coding upstream 13296 6099445 ~ 6124753 (-)
G219734 NA non-coding upstream 20617 6106766 ~ 6120817 (-)
G219748 NA non-coding upstream 67342 6153491 ~ 6153948 (-)
G219733 NA non-coding upstream 70066 6156215 ~ 6157934 (-)
G219761 NA non-coding upstream 95632 6181781 ~ 6182031 (-)
G219592 NA other downstream 333076 5751724 ~ 5752094 (-)
G219591 NA other downstream 336456 5748158 ~ 5748714 (-)
G219500 NA other downstream 396879 5687725 ~ 5688291 (-)
G219290 LOC106593286 other downstream 1075764 5008084 ~ 5009406 (-)
G219200 NA other downstream 1313119 4770350 ~ 4772051 (-)
LOC110534138 LOC106605946 other upstream 243453 6329602 ~ 6349701 (-)
G219820 LOC106605946 other upstream 246819 6332968 ~ 6338813 (-)
LOC110507902 LOC106593870 other upstream 400351 6479543 ~ 6491729 (-)
LOC110508304 gtpbp10 other upstream 843842 6929457 ~ 6932661 (-)
LOC118964351 LOC106605995 other upstream 862649 6948445 ~ 6952369 (-)

Expression


Co-expression Network