G218763


Basic Information

Item Value
gene id G218763
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 6186304 ~ 6188327 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU249402
CTAGAACAGTAGTGGAACCATCAGAACACTGAGTTAACCTGGATTCACTATAGGAAACACTAGAACAGTAGTGGATCTATCAGAACATTGAGTCACGCTGGAACCACTAAAGGAAACACTAGAACAGTAGTGGAACCATCAGAACACTGAGTCAACCTGTGAACACTAAAGGAAACACTAGAACAGTAGTGGAACCATCAGAACACTGAGTCAACCTGTAACCACTAAAGGAAACACCAGAAGAGTAGTGGAACAATCTGAACATTGAGTTAACCTGTAGAACACTAAAGAAAACACTAGAACAGTAGTGGAACCATCAGAACACTGAGTTAACCTGGAACCACTAAAGGGAACACCGGAACAGTATTGGAACCATCAGAACATTGAGTTAACCTGTAGAACCCTGAAGGAAACACTAGAACAGTAGTGGAACCATCAGAACACTGAGTTAACCTGGAACCACTAAAGGAACCACTAGAACAGTAGTGGAACCATCAGAATACTGAGTTAACCTGGAACCACTAAAGGAACCACTAGAACAATATTGGAACAATCAGAACATTGAGTTAACCTGTAGAATACTAAAGGAAACACTAGAACAGTAGTAGAACCATCAGAACATTGAGTTACCCTGTAGAACACTAAAGGAAACACTAGAACAGTAGTGGAACCATCAGAACATTTAGTCAACCTGGAACCACTAAAGGAAACACTAGAAAAGTAGTGGAACCATAAGAACATTGAGTTAACCTGTAGAACACTAAAGGTAACACTAGAACAGTAGTGGAACCATCAGAACACTGAGTTGACCTGTAGAATACTAAAGGAAACACTAGAACAGTAGTGGAACCATCAGAACATTGAGTTAACCTGTAGAACACTAAAGGAAACACTAGAACAGTAGTGGATCCATCAGAACACTGAGTCAACCTGGAACCGCTAAAGGAAACACTAGAACGGTAGTGGAACCATCAGAACATTGAGTTAACCTGTAGAACACTAAAGGAAACACTAGAACAGTAGTGAAACCATCAGAACATTTAGTCAACCTGGAACCACTAAAGGAAACACTAGAACAGTAGTGAAACCATCAGAACATTTAGTCAACCTGGAACCACTAAAGGAAACACTAGAACAGTAGTGGAACCATCAGAACATTTAGTCAACCTGGAACCACTAAAGGAAACACTAGAACAGTAGTGGAACCATCAGAACATTGAGTTAACCTTTAGAATACCAAAGGAAACACTAGAACAGTAGTGGAACCATCAGAACACTGAGTTAACCTGGAACCACTAAAGGAACCACTAGAACAATATTGGAACCATCAGAACACTGAGTTAACCTGGAACCACTAAAGGAACCACTAGAACAGTAGTGGAACCATCAGAACATTGAGTTAACCTGTAGAACACTAACGGTAACACTAGAACAGTAGTGGAACCATCAGAACATTGAGTTAACCTGTAGAATACTAAAGGAAACACTAGAACAATATTGGAACCATCAGAACACTGAGTCAACCTGGAACCGCTAAAGGAAACACTAGAACGGTAGTGGAACCATCAGAACACTGAGTTAACCTGGAACCACTAAAGGAACCACTAGAACAATATTGGAACCATCAGAACACTGAGTCAACCTGGAACCACTAAAGGAAACACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249402 True 1665 lncRNA 0.40 2 6186304 6188327

Neighbor

gene id symbol gene type direction distance location
LOC110535756 stx17 coding upstream 28364 6129251 ~ 6157940 (+)
LOC110534158 nr4a3 coding upstream 61905 6088505 ~ 6124399 (+)
LOC110508220 sc61b coding upstream 222324 5957257 ~ 5963980 (+)
LOC110508149 LOC106593364 coding upstream 290771 5822391 ~ 5898142 (+)
trnat-ugu-30 NA coding upstream 385355 5800877 ~ 5800949 (+)
LOC110535707 LOC106574428 coding downstream 59942 6248078 ~ 6254241 (+)
LOC110534143 tmem67 coding downstream 71577 6259904 ~ 6277154 (+)
LOC110535685 LOC106606054 coding downstream 89147 6277474 ~ 6290170 (+)
LOC110489435 LOC106570746 coding downstream 188961 6377288 ~ 6399616 (+)
LOC110508031 esrp1 coding downstream 237807 6426134 ~ 6448961 (+)
G218759 NA non-coding upstream 5093 6180989 ~ 6181211 (+)
G218689 NA non-coding upstream 84958 6047450 ~ 6101346 (+)
G218681 NA non-coding upstream 161732 6024279 ~ 6024572 (+)
G218766 NA non-coding downstream 5412 6193739 ~ 6194610 (+)
G218769 NA non-coding downstream 12600 6200927 ~ 6201398 (+)
G218780 NA non-coding downstream 49242 6237569 ~ 6238625 (+)
G218783 NA non-coding downstream 76721 6265048 ~ 6265311 (+)
G218784 NA non-coding downstream 77930 6266257 ~ 6266504 (+)
G218558 NA other upstream 437562 5748225 ~ 5748742 (+)
G218487 NA other upstream 552823 5543930 ~ 5633481 (+)
LOC110534148 invs other downstream 19176 6174662 ~ 6228920 (+)
G218842 LOC106605951 other downstream 262011 6450338 ~ 6455202 (+)
LOC110520771 fam171a1 other downstream 416995 6560989 ~ 6607009 (+)

Expression


Co-expression Network