G218769


Basic Information

Item Value
gene id G218769
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 6200927 ~ 6201398 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU249408
tctgagaaccaacaggaaagaacagagaggagagagtctgagaaccaacaggaaagaacagagaggagagagtctgagaaccaataggaaagaacagagaggagaagagagaggagagagtctgagaaccaacaggaaagaacagagaggagagagtctgagaaccaatgggaaagaacagagaggagaagagagaggagttcgtctgagaaccaacaggaaagaacagagaggagagagtctgacaaccaataggaaagaacagagaggagaagagagagtctgagaaccaacaggaaagaacagagaggagagagtctgagatccaacaggaaagaacagagaggagaagagagaggagagagtctgagaaccaacaggaaagaacagagaggagagagtctgagaaccaataggaaagaacagagaagagagaggagagagtgagaaccaacaggaaagaaccgagagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249408 True 472 lncRNA 0.39 1 6200927 6201398

Neighbor

gene id symbol gene type direction distance location
LOC110535756 stx17 coding upstream 42987 6129251 ~ 6157940 (+)
LOC110534158 nr4a3 coding upstream 76528 6088505 ~ 6124399 (+)
LOC110508220 sc61b coding upstream 236947 5957257 ~ 5963980 (+)
LOC110508149 LOC106593364 coding upstream 305394 5822391 ~ 5898142 (+)
trnat-ugu-30 NA coding upstream 399978 5800877 ~ 5800949 (+)
LOC110535707 LOC106574428 coding downstream 46871 6248078 ~ 6254241 (+)
LOC110534143 tmem67 coding downstream 58506 6259904 ~ 6277154 (+)
LOC110535685 LOC106606054 coding downstream 76076 6277474 ~ 6290170 (+)
LOC110489435 LOC106570746 coding downstream 175890 6377288 ~ 6399616 (+)
LOC110508031 esrp1 coding downstream 224736 6426134 ~ 6448961 (+)
G218766 NA non-coding upstream 6317 6193739 ~ 6194610 (+)
G218763 NA non-coding upstream 12600 6186304 ~ 6188327 (+)
G218759 NA non-coding upstream 19716 6180989 ~ 6181211 (+)
G218689 NA non-coding upstream 99581 6047450 ~ 6101346 (+)
G218780 NA non-coding downstream 36171 6237569 ~ 6238625 (+)
G218783 NA non-coding downstream 63650 6265048 ~ 6265311 (+)
G218784 NA non-coding downstream 64859 6266257 ~ 6266504 (+)
G218791 LOC106605873 non-coding downstream 101868 6303266 ~ 6305269 (+)
G218793 NA non-coding downstream 104369 6305767 ~ 6307238 (+)
G218558 NA other upstream 452185 5748225 ~ 5748742 (+)
G218487 NA other upstream 567446 5543930 ~ 5633481 (+)
LOC110534148 invs other downstream 6105 6174662 ~ 6228920 (+)
G218842 LOC106605951 other downstream 248940 6450338 ~ 6455202 (+)
LOC110520771 fam171a1 other downstream 403924 6560989 ~ 6607009 (+)

Expression


Co-expression Network