G219798



Basic Information


Item Value
gene id G219798
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 6236198 ~ 6236600 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU250720
GGAAAAGTTTAACATTGTTTCTCACCTCTGAAAGTTTGTGTGATGCCCTCTCGTCTCACCTGTACCCCTCTGTCGCtctctacagtgtgtgtgatgtCCTCTCGTCTCACCTGTACCCCTCTGTCGCtctctacagtgtgtgtgatgtCCTCTCGTCTCACCTGTACCCCTCTGTCAttctctacagtgtgtgtgtgagcagtggCATAGAGAACATGTAGGGAGCACTAAAAACGGCATATTGTAATGTACTTGTTGGCCCCAACCTGTTATGTATCTCTTGGATGTGTGGAGAAAGGCC

Function


GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU250720 True 301 lncRNA 0.49 2 6236198 6236600

Neighbor


gene id symbol gene type direction distance location
trnat-cgu-2 NA coding downstream 12329 6223797 ~ 6223869 (-)
LOC110535692 LOC106593159 coding downstream 62802 6158030 ~ 6173396 (-)
LOC110520778 LOC106606060 coding downstream 279166 5951557 ~ 5957032 (-)
LOC110508167 LOC106606061 coding downstream 303241 5927299 ~ 5932957 (-)
LOC110508150 tmem245 coding downstream 310527 5908171 ~ 5925671 (-)
LOC110535663 cdh17 coding upstream 63397 6299997 ~ 6325652 (-)
LOC118936454 LOC106605946 coding upstream 91494 6328094 ~ 6332714 (-)
LOC118944879 LOC106605946 coding upstream 96375 6332975 ~ 6333735 (-)
LOC110534138 LOC106605946 coding upstream 101292 6329602 ~ 6349701 (-)
LOC118944880 rad54b coding upstream 117495 6354095 ~ 6377182 (-)
G219782 NA non-coding downstream 29095 6205869 ~ 6207103 (-)
G219762 NA non-coding downstream 50233 6182169 ~ 6185965 (-)
G219761 NA non-coding downstream 54167 6181781 ~ 6182031 (-)
G219733 NA non-coding downstream 78264 6156215 ~ 6157934 (-)
G219748 NA non-coding downstream 82250 6153491 ~ 6153948 (-)
G219799 NA non-coding upstream 2369 6238969 ~ 6240513 (-)
G219775 NA non-coding upstream 11505 6248105 ~ 6249556 (-)
G219776 NA non-coding upstream 20410 6257010 ~ 6257525 (-)
G219802 NA non-coding upstream 26777 6263377 ~ 6263852 (-)
G219804 NA non-coding upstream 34354 6270954 ~ 6271897 (-)
G219592 NA other downstream 484104 5751724 ~ 5752094 (-)
G219591 NA other downstream 487484 5748158 ~ 5748714 (-)
G219500 NA other downstream 547907 5687725 ~ 5688291 (-)
G219290 LOC106593286 other downstream 1226792 5008084 ~ 5009406 (-)
G219200 NA other downstream 1464147 4770350 ~ 4772051 (-)
G219820 LOC106605946 other upstream 96368 6332968 ~ 6338813 (-)
LOC110507902 LOC106593870 other upstream 249900 6479543 ~ 6491729 (-)
LOC110508304 gtpbp10 other upstream 693391 6929457 ~ 6932661 (-)
LOC118964351 LOC106605995 other upstream 712198 6948445 ~ 6952369 (-)

Expression



Co-expression Network