G218784


Basic Information

Item Value
gene id G218784
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 6266257 ~ 6266504 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU249427
ggagcaagcccatgtaatgctttgtaggttagcagtaaaaccttgaaatcagcccttgccttaacaggaagccaatgtagggaggctagcactggagtaatatgatccaattatttggttctagtcaggattctagcagccgtatttagcactaactgaagtttatttagtgctttatccgggtagccggaaagtagagcattacagtagtctaacctagaagtaacaaaagcatggattcatttctc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249427 True 248 lncRNA 0.36 1 6266257 6266504

Neighbor

gene id symbol gene type direction distance location
LOC110535707 LOC106574428 coding upstream 12016 6248078 ~ 6254241 (+)
LOC110534148 invs coding upstream 37337 6174662 ~ 6228920 (+)
LOC110535756 stx17 coding upstream 108317 6129251 ~ 6157940 (+)
LOC110534158 nr4a3 coding upstream 141858 6088505 ~ 6124399 (+)
LOC110508220 sc61b coding upstream 302277 5957257 ~ 5963980 (+)
LOC110535685 LOC106606054 coding downstream 10970 6277474 ~ 6290170 (+)
LOC110489435 LOC106570746 coding downstream 110784 6377288 ~ 6399616 (+)
LOC110508031 esrp1 coding downstream 159630 6426134 ~ 6448961 (+)
LOC110508070 NA coding downstream 225710 6492214 ~ 6496204 (+)
LOC110507908 LOC106605953 coding downstream 233041 6499545 ~ 6510342 (+)
G218783 NA non-coding upstream 946 6265048 ~ 6265311 (+)
G218780 NA non-coding upstream 27632 6237569 ~ 6238625 (+)
G218769 NA non-coding upstream 64859 6200927 ~ 6201398 (+)
G218766 NA non-coding upstream 71647 6193739 ~ 6194610 (+)
G218763 NA non-coding upstream 77930 6186304 ~ 6188327 (+)
G218791 LOC106605873 non-coding downstream 36762 6303266 ~ 6305269 (+)
G218793 NA non-coding downstream 39263 6305767 ~ 6307238 (+)
G218794 NA non-coding downstream 41318 6307822 ~ 6318435 (+)
G218798 LOC106605946 non-coding downstream 61874 6328378 ~ 6338768 (+)
G218801 NA non-coding downstream 75446 6341950 ~ 6342178 (+)
LOC110534143 tmem67 other upstream 3900 6259904 ~ 6277154 (+)
G218842 LOC106605951 other downstream 183834 6450338 ~ 6455202 (+)
LOC110520771 fam171a1 other downstream 338818 6560989 ~ 6607009 (+)
LOC110507851 acbd7 other downstream 358080 6624575 ~ 6631601 (+)
G218971 NA other downstream 451124 6717628 ~ 6719163 (+)
LOC110507732 LOC106576036 other downstream 528056 6794547 ~ 6811294 (+)

Expression


Co-expression Network