G219811


Basic Information

Item Value
gene id G219811
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 6299330 ~ 6299826 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU250736
ATGTAATTTTATGTGTATGTGAGAAGGTTGTGAGAGGAATGTAGGTGCGTGCTTGTGTATGTTTCTGAAAGGTGAGTGATGAGGTAACTGTAATAACCATTAAAACTTCTCTACTCTGGTCATAACTGCAGAGAAGTCCGCCATGTTGATTGTACAGCAGCAGCTTTTTATACCTCTGTGAAAAGGCTTCTGATGAGGAACATTCATTATAGGTGGTATTTAAGTGGTATAACACCTGAGAATGAATGCATTAGTTTATGTAGGTCTTTCTCCTtctgcttgtttttgtgtctACCTGTCATTCTGTCCTCAATGCTACTGAGCTGAATGATGATGACTCGtctcaaggagagagagaaagaaagagaaataaagagagaaagagagagggggatagggaaGAACTGAAGAGTTGTCTTAATGGTACTGGGAGAATGAAAGCGAATTATCTCTCTGCAAATGATTTCACAgctattctttcaaaataatgtttattt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250736 True 497 lncRNA 0.53 1 6299330 6299826

Neighbor

gene id symbol gene type direction distance location
LOC110535643 tex10 coding downstream 39514 6228912 ~ 6259816 (-)
trnat-cgu-2 NA coding downstream 75461 6223797 ~ 6223869 (-)
LOC110535692 LOC106593159 coding downstream 125934 6158030 ~ 6173396 (-)
LOC110520778 LOC106606060 coding downstream 342298 5951557 ~ 5957032 (-)
LOC110508167 LOC106606061 coding downstream 366373 5927299 ~ 5932957 (-)
LOC110535663 cdh17 coding upstream 171 6299997 ~ 6325652 (-)
LOC118936454 LOC106605946 coding upstream 28268 6328094 ~ 6332714 (-)
LOC118944879 LOC106605946 coding upstream 33149 6332975 ~ 6333735 (-)
LOC110534138 LOC106605946 coding upstream 38066 6329602 ~ 6349701 (-)
LOC118944880 rad54b coding upstream 54269 6354095 ~ 6377182 (-)
G219810 NA non-coding downstream 5440 6290618 ~ 6293890 (-)
G219808 LOC106606054 non-coding downstream 9169 6288099 ~ 6290161 (-)
G219807 NA non-coding downstream 26106 6272494 ~ 6273224 (-)
G219804 NA non-coding downstream 27433 6270954 ~ 6271897 (-)
G219802 NA non-coding downstream 35478 6263377 ~ 6263852 (-)
G219819 NA non-coding upstream 27351 6327177 ~ 6331994 (-)
G219822 NA non-coding upstream 44831 6344657 ~ 6407068 (-)
G219847 NA non-coding upstream 86163 6385989 ~ 6386209 (-)
cf191 cf191 non-coding upstream 196869 6496695 ~ 6499580 (-)
G219970 fam171a1 non-coding upstream 303356 6603182 ~ 6607008 (-)
G219592 NA other downstream 547236 5751724 ~ 5752094 (-)
G219591 NA other downstream 550616 5748158 ~ 5748714 (-)
G219500 NA other downstream 611039 5687725 ~ 5688291 (-)
G219290 LOC106593286 other downstream 1289924 5008084 ~ 5009406 (-)
G219200 NA other downstream 1527279 4770350 ~ 4772051 (-)
G219820 LOC106605946 other upstream 33142 6332968 ~ 6338813 (-)
LOC110507902 LOC106593870 other upstream 186674 6479543 ~ 6491729 (-)
LOC110508304 gtpbp10 other upstream 630165 6929457 ~ 6932661 (-)
LOC118964351 LOC106605995 other upstream 648972 6948445 ~ 6952369 (-)

Expression


Co-expression Network