G218807


Basic Information

Item Value
gene id G218807
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 6353777 ~ 6354480 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU249460
tccctttacacttctgtgtttaaggtagttgttgtgaaattgttaggttagattactcgttggttattactgcattgtcgggaactagaagcacaagcatttcgctaccctcgcattaacatctgctaatcatgtgtatgtgatcaataacatctgctaaccatgtgtatgtgaccattaacatctgctaaccatgtgtttgtgaccattaacatctgctaaccatgtgtttgtgaccattaacatctgctaaccatgtgtatgtgacaaataacatttgatttgattcatcttGTTATTTCTGCAACAGAAAAAAAGACTGATGGAATACACAGTATAACGTAGCAGTTTATTCCATAATTTACACGTTCTCTTCTATCAAACTGTAAAAACAGTAGAGAATATAAAGACAGAATAACATAGTCCAATGTTTCTCAGAAAGGGACACTTCTTTGGTCTCTGCATAAGGTCATTTGCggaaagcctgtgtgtgtgtgtgttactgagtGATGTGTGAGATGGTGGACTGGAAGGCGAAGGAGATGTGGGTTCGTGCATGGTCCAGGTAAGCAtctctgaaggtgtgtgtgtcccCTGCGAAGTGTCTCCACTGTATCAGCTCTGACATGCTCAGATGCTTCTGCCTTGCCCCACCACGGTCACCTTGACGACC

Function

NR:

description
DNA repair and recombination protein RAD54B-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249460 True 673 lncRNA 0.35 2 6353777 6354480

Neighbor

gene id symbol gene type direction distance location
LOC110535685 LOC106606054 coding upstream 63607 6277474 ~ 6290170 (+)
LOC110534143 tmem67 coding upstream 76623 6259904 ~ 6277154 (+)
LOC110535707 LOC106574428 coding upstream 99536 6248078 ~ 6254241 (+)
LOC110534148 invs coding upstream 124857 6174662 ~ 6228920 (+)
LOC110535756 stx17 coding upstream 195837 6129251 ~ 6157940 (+)
LOC110489435 LOC106570746 coding downstream 22808 6377288 ~ 6399616 (+)
LOC110508031 esrp1 coding downstream 71654 6426134 ~ 6448961 (+)
LOC110508070 NA coding downstream 137734 6492214 ~ 6496204 (+)
LOC110507908 LOC106605953 coding downstream 145065 6499545 ~ 6510342 (+)
LOC110508080 LOC106606035 coding downstream 158812 6513292 ~ 6527389 (+)
G218801 NA non-coding upstream 11599 6341950 ~ 6342178 (+)
G218798 LOC106605946 non-coding upstream 15009 6328378 ~ 6338768 (+)
G218794 NA non-coding upstream 35342 6307822 ~ 6318435 (+)
G218793 NA non-coding upstream 46539 6305767 ~ 6307238 (+)
G218791 LOC106605873 non-coding upstream 48508 6303266 ~ 6305269 (+)
G218839 NA non-coding downstream 79967 6434447 ~ 6439646 (+)
G218842 LOC106605951 non-coding downstream 95858 6450338 ~ 6455202 (+)
G218862 NA non-coding downstream 162388 6516868 ~ 6545971 (+)
G218892 NA non-coding downstream 202297 6556777 ~ 6609484 (+)
LOC110508220 sc61b other upstream 389981 5957257 ~ 5963980 (+)
LOC110520771 fam171a1 other downstream 250842 6560989 ~ 6607009 (+)
LOC110507851 acbd7 other downstream 270104 6624575 ~ 6631601 (+)
G218971 NA other downstream 363148 6717628 ~ 6719163 (+)
LOC110507732 LOC106576036 other downstream 440080 6794547 ~ 6811294 (+)

Expression


Co-expression Network