G218839


Basic Information

Item Value
gene id G218839
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 6434447 ~ 6439646 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU249514
gtctgtgtgtgtttgtggctgtgtttgtgtgtgtgtctgtgtgtttgtggctgtgtgtgtgtggctgtgtgtgtctgtgtgcgtgtgtgtctgtggctgtgtgtgtgcgtgcatgtgtgtgtgtgtgtgtttgctatcCTCCTCATCGCCTGGCGTTCTGGTTAATGGGAGATTTGTTGAGTAAACACTTAAATGCTCTTGTCTGTGAAAGATTACCCtcctaatacacacacaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacccacacacctcacctcacctcacctcacttcacctcacttcacctcacctcacctctcatAGTCTTAATAGCCCTATTCATTGATAAGCAGGTGTCTCAGCTCTCAGTGTAGTAACATTCCCATGCACTTAGACTCCTACACAGTACAGGTTTAAATGTTCTAGTGGTTTTAgactcctatacagtacaggttTATATGTTCTAGTGGTTTTAGACTCCTACACAGTACAGGTTTAAATGTTCTAGTGGTTTTAGACTCCTACACAGTACAGGTTTATATGTTCTAGTGGTTTCAgactcctatacagtacaggttTATATGTTCTAGTGGTTTTAGACTCCTACACAGTACAGgtttatatgttatagtggtttcagactcctatacagtacaggtttatatgttctagtggtttcagactcctatacagtacaggtttatatgttctagtggtttcagactcctatacagtacaggtttatatgttctagtggttttagactcctatacagtacaggtttatatgttctagtggtttcagactcctacacagtacaggtttatatgttctagtggtttcagactcctatacagtacaggtttatatgttctagtggtttcagactcctacacagtacaggtttatatgttctagtggtttcagactcctatacagtacaggtttatatgttctagtggttttagactcctatacagtacaggttTATATGTTCTAGTGGTTTCAGACTCCTACACAGTACAGGTTTATATGTTCTAGTGGTTTTAGACTCCTACACAGTACAGGTTTAAATGTTCTAGTGGTTTCAGACTCTTACACAGTACAGgttTATATGTTCTAGTGGTTTCAGACTCCTTCACAGTACAGGTTTATATGTTATAGTGGTTTCAGACTCCTACACAGTACAGGTGAGAGGTCAAGAGGTCAGAGTTCAGTGGTAGTGAGTGACCCTGAGGGGGCTGGGTTACAGTTCTTCTCCAGGACGGTAAACATTGTGATATCCTGTTGGCAACCAGCCAGATCTCTACtgtcaacacacaaacacacacacacctttttaatacagacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249514 True 1387 lncRNA 0.42 4 6434447 6439646

Neighbor

gene id symbol gene type direction distance location
LOC110489435 LOC106570746 coding upstream 34831 6377288 ~ 6399616 (+)
LOC110535685 LOC106606054 coding upstream 144277 6277474 ~ 6290170 (+)
LOC110534143 tmem67 coding upstream 157293 6259904 ~ 6277154 (+)
LOC110535707 LOC106574428 coding upstream 180206 6248078 ~ 6254241 (+)
LOC110534148 invs coding upstream 205527 6174662 ~ 6228920 (+)
LOC110508070 NA coding downstream 52568 6492214 ~ 6496204 (+)
LOC110507908 LOC106605953 coding downstream 59899 6499545 ~ 6510342 (+)
LOC110508080 LOC106606035 coding downstream 73646 6513292 ~ 6527389 (+)
LOC110520771 fam171a1 coding downstream 121343 6560989 ~ 6607009 (+)
nmt2 LOC106576081 coding downstream 171453 6611099 ~ 6620958 (+)
G218805 NA non-coding upstream 27361 6344845 ~ 6407086 (+)
G218807 NA non-coding upstream 79967 6353777 ~ 6354480 (+)
G218801 NA non-coding upstream 92269 6341950 ~ 6342178 (+)
G218798 LOC106605946 non-coding upstream 95679 6328378 ~ 6338768 (+)
G218794 NA non-coding upstream 116012 6307822 ~ 6318435 (+)
G218842 LOC106605951 non-coding downstream 10692 6450338 ~ 6455202 (+)
G218862 NA non-coding downstream 77222 6516868 ~ 6545971 (+)
G218892 NA non-coding downstream 117131 6556777 ~ 6609484 (+)
G218929 NA non-coding downstream 158581 6598227 ~ 6599147 (+)
LOC110535756 stx17 other upstream 278310 6129251 ~ 6157940 (+)
LOC110508220 sc61b other upstream 470651 5957257 ~ 5963980 (+)
LOC110507851 acbd7 other downstream 184938 6624575 ~ 6631601 (+)
G218971 NA other downstream 277982 6717628 ~ 6719163 (+)
LOC110507732 LOC106576036 other downstream 354914 6794547 ~ 6811294 (+)

Expression


Co-expression Network