G218862


Basic Information

Item Value
gene id G218862
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 6516868 ~ 6545971 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU249549
tgttaaaagcgcagagagcatcatgaagaacaaggaacacaccagatacacacgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagcgttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtaacagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgttgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249549 True 482 lncRNA 0.43 2 6516868 6545971

Neighbor

gene id symbol gene type direction distance location
LOC110507908 LOC106605953 coding upstream 6526 6499545 ~ 6510342 (+)
LOC110508070 NA coding upstream 20664 6492214 ~ 6496204 (+)
LOC110508031 esrp1 coding upstream 67907 6426134 ~ 6448961 (+)
LOC110489435 LOC106570746 coding upstream 117252 6377288 ~ 6399616 (+)
LOC110535685 LOC106606054 coding upstream 226698 6277474 ~ 6290170 (+)
LOC110520771 fam171a1 coding downstream 15018 6560989 ~ 6607009 (+)
nmt2 LOC106576081 coding downstream 65128 6611099 ~ 6620958 (+)
LOC110507851 acbd7 coding downstream 78604 6624575 ~ 6631601 (+)
LOC118936368 NA coding downstream 86143 6632114 ~ 6635038 (+)
LOC110507805 LOC106606004 coding downstream 96532 6642503 ~ 6654110 (+)
G218842 LOC106605951 non-coding upstream 61666 6450338 ~ 6455202 (+)
G218839 NA non-coding upstream 77222 6434447 ~ 6439646 (+)
G218805 NA non-coding upstream 109782 6344845 ~ 6407086 (+)
G218807 NA non-coding upstream 162388 6353777 ~ 6354480 (+)
G218892 NA non-coding downstream 10806 6556777 ~ 6609484 (+)
G218929 NA non-coding downstream 52256 6598227 ~ 6599147 (+)
G218966 NA non-coding downstream 154877 6700848 ~ 6701347 (+)
G218986 NA non-coding downstream 189049 6735020 ~ 6735498 (+)
LOC110507743 LOC106605986 non-coding downstream 226368 6754839 ~ 6773064 (+)
LOC110534143 tmem67 other upstream 254511 6259904 ~ 6277154 (+)
LOC110535707 LOC106574428 other upstream 263277 6248078 ~ 6254241 (+)
LOC110534148 invs other upstream 305901 6174662 ~ 6228920 (+)
LOC110535756 stx17 other upstream 360731 6129251 ~ 6157940 (+)
G218971 NA other downstream 171657 6717628 ~ 6719163 (+)
LOC110507732 LOC106576036 other downstream 248589 6794547 ~ 6811294 (+)
LOC110520781 osgin2 other downstream 392629 6937600 ~ 6947976 (+)

Expression


Co-expression Network