G219017


Basic Information

Item Value
gene id G219017
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 6797874 ~ 6801798 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU249734
ccaaatcaaatcaaagtttatttgtcacgtgcgccgaatacaacaggtgtatgtagaccttacagtgaaatgcttacttacaggctctaaccaatagtgcaaaaaaggtgttaggtgaacaataggtaagtaaagaaataaaacaacagtaaaaatactatatacagactatatacagtagctaggctataaaagtagcgaggctacatacagacaccggtaagtcaggctgattgaggtagtatgtacatgtagatatggttaaagtgactatgcatatatgatggacagagagtagcactagcgtaaaagagggggtggtgggtggcgggacacaatgcagatagcccggttagccaatgtgtgggagcactggttggtcggcccaattgaggtagtatgtacatgaatgtatagttaaagtgactatgcatatatgataaacagagaatagcagcagcttaaaaagaggggttggcaggggcacaaaatgcaaatagtccgggtaaccatttgattagctgttcaggagtcttatggcttgggggtaaaaactgttgagaagcctttttgtcctggacttggcactccggtaccgcttgccatgcggtagtagagagaacagtctatgacttgggtggctggcgtcttagggccttcctctgacaccggtgtagagttcctggatggcaggcagcttagccccagtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249734 True 710 lncRNA 0.42 2 6797874 6801798

Neighbor

gene id symbol gene type direction distance location
LOC110507774 LOC106605985 coding upstream 21394 6773881 ~ 6777798 (+)
LOC110507743 LOC106605986 coding upstream 24810 6754839 ~ 6773064 (+)
LOC110507826 LOC106576069 coding upstream 85207 6659724 ~ 6712667 (+)
LOC110507805 LOC106606004 coding upstream 143764 6642503 ~ 6654110 (+)
LOC118936368 NA coding upstream 162836 6632114 ~ 6635038 (+)
LOC110508266 LOC106511201 coding downstream 26885 6828683 ~ 6929400 (+)
LOC110520781 osgin2 coding downstream 135802 6937600 ~ 6947976 (+)
LOC110508323 LOC106575347 coding downstream 177697 6979131 ~ 6988449 (+)
them4 LOC106592246 coding downstream 191269 6993067 ~ 6996424 (+)
LOC110520784 LOC106575322 coding downstream 214893 7016691 ~ 7045216 (+)
G218986 NA non-coding upstream 62376 6735020 ~ 6735498 (+)
G218966 NA non-coding upstream 96527 6700848 ~ 6701347 (+)
G218892 NA non-coding upstream 188390 6556777 ~ 6609484 (+)
G219026 NA non-coding downstream 14488 6816286 ~ 6816579 (+)
G219063 NA non-coding downstream 61141 6862939 ~ 6865651 (+)
G220134 NA non-coding downstream 152351 6954149 ~ 6954739 (+)
G220125 NA non-coding downstream 175206 6977004 ~ 6977467 (+)
G218971 NA other upstream 78711 6717628 ~ 6719163 (+)
LOC110507851 acbd7 other upstream 166273 6624575 ~ 6631601 (+)
LOC110520771 fam171a1 other upstream 190865 6560989 ~ 6607009 (+)
G218842 LOC106605951 other upstream 342672 6450338 ~ 6455202 (+)
LOC110534143 tmem67 other upstream 535517 6259904 ~ 6277154 (+)
LOC110536044 LOC106575458 other downstream 546494 7348131 ~ 7357408 (+)
G220435 NA other downstream 557870 7359668 ~ 7365285 (+)
G220445 LOC106575489 other downstream 576460 7378258 ~ 7381563 (+)

Expression


Co-expression Network