XLOC_021812


Basic Information

Item Value
gene id XLOC_021812
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 32480330 ~ 32487726 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044855
gaaaattagggaaaaaattctgtgtgtgtgtttatggagggccactgtgggcctttttcTTGTGTAATGGATAGCTTGTGCCTACAAAGAAGAGTTTTATGCCATATTCCAGTTTTAAACATAAgtctaatttgcatctttgaataGAAACAGCTACTGACAACAcatgataaaaatattacattattatatataattatatgtttttaaataactcaacccctaacattttttacatattacaaatcataatccaaaaaaaaaaaaaaaaagatgtggaaatgttttattgttgccttaataattttaatttgttttactaTGTATACTTCTATGTTAAGTAGCTTTGGCACAATCGACCACTAGACCACTTTAGTTGGCCATTAGTCAGTTAAACAGAGAGTTCAACCTTAAAGCCACATGACTGGCAGAGCCAACATTGCTATGCTCAAGTAATGTTTGACCGAGCTacaaaagcacagtttaaacacatATGAGGAATGAACCTACAAATTGCTTTAATTTGTCTCTGCACTTTAAACTGGGATCGGGATCAAAAcaatccaaaataataataatacataattcaCCTTTAAGAATTTAGTTGAGCTATGCTGTCTTGTTGTAAATGATCtacgaacaaaaaaaaaacattttcagaaaatatatgatataataagttCACGGATGGATCTGGCAGGAAGTTATAATGCATTCCATCTGGATGCCCTCTCACTGGATGGATCTTAAAAGAAACTCCAGAAATAAAACCACTACAGATGCGTCACAAACGCAGTGCAAACAACCATATCTCAATCCGCCACACCACTTTCCTCTGAGATCTGTTTCCTCTGTGATTTCCAGTTGATTTTCTCGTATGGAAAAGTGCccactctctgtctgtctctagTTTGCTTTATGATGTTTCAGGGCCTGTTTTCCTTTCCGTGAGTCTTGGAGTGAGCCAGAAGACAAGTCTACTCCAATAAAACATGGAAATTCAAGAATGTAATCCAGATTCCAGTGAGCTTCTCGGCATCCGCCTATTTTCAGATGGGAACCCGATTCGCAGCTCTCGAATGTGCTTGATAGACACATTCAGCGGCTTCAGTAATCTCCATTAATTCCATGCATTACTCAACGGCTGTCTGTCAACGGTGTTTCTTTTTGGCTcggcatttgtttgtttgtttctctttTAAGTCCCCATTGATGATATCAATGTCCCATTTGGCATGAGACGCGAGCACAGGCCTGGTCTTGGTCAGTCTGACCGCTGCTTGTTTGAACAGGCCTTCAGTTTTTGTTTGGACAGACAAGGGAGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044855 True 1325 lncRNA 0.38 2 32480330 32487726

Neighbor

gene id symbol gene type direction distance location
XLOC_021811 si:ch211-66i15.5 coding upstream 45397 32426954 ~ 32434933 (+)
XLOC_021809 taf8 coding upstream 56982 32392461 ~ 32423348 (+)
XLOC_021810 si:ch211-66i15.5 coding upstream 70402 32406009 ~ 32409928 (+)
XLOC_021808 slc39a5 coding upstream 128151 32335871 ~ 32352179 (+)
XLOC_021807 NA coding upstream 227253 32250356 ~ 32253077 (+)
XLOC_021813 si:dkey-261h17.1 coding downstream 12190 32499916 ~ 32532612 (+)
XLOC_021814 NA coding downstream 74884 32562610 ~ 32562814 (+)
XLOC_021815 NA coding downstream 89324 32577050 ~ 32579434 (+)
XLOC_021816 AL928610.1 coding downstream 631284 33119010 ~ 33119124 (+)
XLOC_021817 dre-mir-205 coding downstream 802547 33290273 ~ 33290361 (+)
XLOC_021806 NA non-coding upstream 266970 32210258 ~ 32213360 (+)
XLOC_021805 CU041363.1 non-coding upstream 278836 32194408 ~ 32201494 (+)
XLOC_021795 NA non-coding upstream 594417 31863739 ~ 31885913 (+)
XLOC_021793 BX927365.3 non-coding upstream 812787 31667429 ~ 31667543 (+)
XLOC_021820 NA non-coding downstream 967837 33455563 ~ 33459265 (+)

Expression


Co-expression Network