Gene
RNA
| Item | Value |
|---|---|
| gene id | G220218 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 6987369 ~ 6988252 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU251242 | True | 884 | lncRNA | 0.37 | 1 | 6987369 | 6988252 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:174935 | LOC106605997 | coding | downstream | 8180 | 6976163 ~ 6979189 (-) |
| LOC118944481 | LOC106575260 | coding | downstream | 33495 | 6953156 ~ 6953874 (-) |
| LOC118964351 | LOC106605995 | coding | downstream | 35000 | 6948445 ~ 6952369 (-) |
| LOC110508304 | gtpbp10 | coding | downstream | 54708 | 6929457 ~ 6932661 (-) |
| LOC110508277 | cld12 | coding | downstream | 82083 | 6901478 ~ 6905286 (-) |
| LOC110508339 | NA | coding | upstream | 646 | 6988898 ~ 6993845 (-) |
| il6r | il6ra | coding | upstream | 219669 | 7158585 ~ 7220080 (-) |
| LOC110520786 | atp8b2 | coding | upstream | 233744 | 7221996 ~ 7320978 (-) |
| LOC118945273 | NA | coding | upstream | 235874 | 7224126 ~ 7226076 (-) |
| LOC110536068 | LOC106595411 | coding | upstream | 334784 | 7323036 ~ 7343283 (-) |
| G220208 | NA | non-coding | downstream | 5272 | 6959523 ~ 6982097 (-) |
| G220201 | NA | non-coding | downstream | 35381 | 6951522 ~ 6951988 (-) |
| G220194 | NA | non-coding | downstream | 46847 | 6940100 ~ 6940522 (-) |
| G220116 | NA | non-coding | downstream | 54148 | 6932984 ~ 6933221 (-) |
| LOC118945258 | NA | non-coding | downstream | 118393 | 6862876 ~ 6869053 (-) |
| G220217 | NA | non-coding | upstream | 75 | 6988327 ~ 6988873 (-) |
| G220222 | NA | non-coding | upstream | 12180 | 7000432 ~ 7001479 (-) |
| G220226 | NA | non-coding | upstream | 28243 | 7016495 ~ 7016709 (-) |
| G220229 | LOC100135938 | non-coding | upstream | 31724 | 7019976 ~ 7061831 (-) |
| G220253 | LOC106575371 | non-coding | upstream | 84890 | 7073142 ~ 7073570 (-) |
| G220209 | LOC105030512 | other | downstream | 16869 | 6967081 ~ 6970500 (-) |
| G220202 | LOC106605995 | other | downstream | 34406 | 6952559 ~ 6952963 (-) |
| LOC110507902 | LOC106593870 | other | downstream | 496354 | 6479543 ~ 6491729 (-) |
| G220242 | LOC100194679 | other | upstream | 94493 | 7082745 ~ 7083691 (-) |
| G220261 | NA | other | upstream | 111086 | 7099338 ~ 7100170 (-) |
| G220751 | NA | other | upstream | 188140 | 7176392 ~ 7201421 (-) |
