G220222


Basic Information

Item Value
gene id G220222
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 7000432 ~ 7001479 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU251246
ATTCCTACTAGTATCAGCtaattaccatgcctactagtatcagttagtttaCCATGCCTATTAGTGTCAGTTAGTTACCAcacctactagtatcagttagtttaCCATGCCTATTAGTGTCAGTTAGTTACCAcacctactagtatcagttcattaccatgcctactagtatcagttagtttaCCATGCCTATTAGTGTCAGTTAGTTACCAcacctactagtatcagttcattaccatgcctactagtatcagttagtttaCCATGCCTATTAGTGTCAGTTAGTTACCAcacctactagtatcagttcatTACCATGTCTACTACTATCAGTTCATTACCATGTCTACtactatcagttagttaccacgcctactagtatcagttaatTACCATGTCTACTACTATCAGTTCATTACCATGTCTACTACTATCAGTTCATTACCATGTCTACTACTATCAGTTCATTACCATGTCTACTACtatcagttcattaccatgcctACTTGTATCTGttcattaccatgcctactagtatcagttcattaccatgcctAGTATTATCAGTTAGTTTACCATGCCTATTAGTGTCAGTTAGTTACCAcacctactagtatcagttagttaccatgcctactagtatccgTTACTAGTATCAGGTAGTTACCATTCCTACTAGTATCAGCtcattaccatgcctactagtatcagttagtttaCCATGCCTATTAGTGTCAGTTAGTTACCAcacctactagtatcagttcattaccatgcctactagtatcagttagtttaCCATGCCTATTAGTGTCAGTTAGTTACCAcacctactagtatcagttcattaccatgcctactagtatcagttagtttaCCATGCCTATTAGTGTCAGTTAGTTACCAcacctactagtatcagttagttaccatgcctactagtatccgTTACTAGTATCAGCtcattaccatgcctactagtatcagttagttaccatgcctactagtatcagctcattaccatgcctactactatcagttcattacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251246 True 1048 lncRNA 0.38 1 7000432 7001479

Neighbor

gene id symbol gene type direction distance location
LOC110508339 NA coding downstream 6587 6988898 ~ 6993845 (-)
zgc:174935 LOC106605997 coding downstream 21243 6976163 ~ 6979189 (-)
LOC118944481 LOC106575260 coding downstream 46558 6953156 ~ 6953874 (-)
LOC118964351 LOC106605995 coding downstream 48063 6948445 ~ 6952369 (-)
LOC110508304 gtpbp10 coding downstream 67771 6929457 ~ 6932661 (-)
il6r il6ra coding upstream 206442 7158585 ~ 7220080 (-)
LOC110520786 atp8b2 coding upstream 220517 7221996 ~ 7320978 (-)
LOC118945273 NA coding upstream 222647 7224126 ~ 7226076 (-)
LOC110536068 LOC106595411 coding upstream 321557 7323036 ~ 7343283 (-)
LOC110537383 LOC105024478 coding upstream 363938 7365417 ~ 7394499 (-)
G220217 NA non-coding downstream 11559 6988327 ~ 6988873 (-)
G220218 NA non-coding downstream 12180 6987369 ~ 6988252 (-)
G220208 NA non-coding downstream 18335 6959523 ~ 6982097 (-)
G220201 NA non-coding downstream 48444 6951522 ~ 6951988 (-)
G220194 NA non-coding downstream 59910 6940100 ~ 6940522 (-)
G220226 NA non-coding upstream 15016 7016495 ~ 7016709 (-)
G220229 LOC100135938 non-coding upstream 18497 7019976 ~ 7061831 (-)
G220253 LOC106575371 non-coding upstream 71663 7073142 ~ 7073570 (-)
G220241 NA non-coding upstream 80344 7081823 ~ 7084303 (-)
G220242 LOC100194679 non-coding upstream 81864 7082745 ~ 7083691 (-)
G220209 LOC105030512 other downstream 29932 6967081 ~ 6970500 (-)
G220202 LOC106605995 other downstream 47469 6952559 ~ 6952963 (-)
G220261 NA other upstream 97859 7099338 ~ 7100170 (-)
G220751 NA other upstream 174913 7176392 ~ 7201421 (-)
LOC110520792 LOC106575505 other upstream 427191 7408252 ~ 7436195 (-)

Expression


Co-expression Network