Gene
RNA
| Item | Value |
|---|---|
| gene id | G220253 |
| gene name | LOC106575371 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 7073142 ~ 7073570 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| phosphatidylinositol 4-phosphate 5-kinase type-1 alpha-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU251297 | True | 331 | lncRNA | 0.40 | 2 | 7073142 | 7073570 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508339 | NA | coding | downstream | 79297 | 6988898 ~ 6993845 (-) |
| zgc:174935 | LOC106605997 | coding | downstream | 93953 | 6976163 ~ 6979189 (-) |
| LOC118944481 | LOC106575260 | coding | downstream | 119268 | 6953156 ~ 6953874 (-) |
| LOC118964351 | LOC106605995 | coding | downstream | 120773 | 6948445 ~ 6952369 (-) |
| LOC110508304 | gtpbp10 | coding | downstream | 140481 | 6929457 ~ 6932661 (-) |
| il6r | il6ra | coding | upstream | 134351 | 7158585 ~ 7220080 (-) |
| LOC110520786 | atp8b2 | coding | upstream | 148426 | 7221996 ~ 7320978 (-) |
| LOC118945273 | NA | coding | upstream | 150556 | 7224126 ~ 7226076 (-) |
| LOC110536068 | LOC106595411 | coding | upstream | 249466 | 7323036 ~ 7343283 (-) |
| LOC110537383 | LOC105024478 | coding | upstream | 291847 | 7365417 ~ 7394499 (-) |
| G220229 | LOC100135938 | non-coding | downstream | 11311 | 7019976 ~ 7061831 (-) |
| G220226 | NA | non-coding | downstream | 56433 | 7016495 ~ 7016709 (-) |
| G220222 | NA | non-coding | downstream | 71663 | 7000432 ~ 7001479 (-) |
| G220217 | NA | non-coding | downstream | 84269 | 6988327 ~ 6988873 (-) |
| G220218 | NA | non-coding | downstream | 84890 | 6987369 ~ 6988252 (-) |
| G220241 | NA | non-coding | upstream | 8253 | 7081823 ~ 7084303 (-) |
| G220242 | LOC100194679 | non-coding | upstream | 9773 | 7082745 ~ 7083691 (-) |
| G220265 | NA | non-coding | upstream | 32366 | 7105936 ~ 7106163 (-) |
| G220270 | NA | non-coding | upstream | 39421 | 7112991 ~ 7113723 (-) |
| G220272 | NA | non-coding | upstream | 42033 | 7115603 ~ 7115892 (-) |
| G220209 | LOC105030512 | other | downstream | 102642 | 6967081 ~ 6970500 (-) |
| G220202 | LOC106605995 | other | downstream | 120179 | 6952559 ~ 6952963 (-) |
| G220261 | NA | other | upstream | 25768 | 7099338 ~ 7100170 (-) |
| G220751 | NA | other | upstream | 102822 | 7176392 ~ 7201421 (-) |
| LOC110520792 | LOC106575505 | other | upstream | 355100 | 7408252 ~ 7436195 (-) |
| LOC110508454 | s10ag | other | upstream | 443630 | 7517195 ~ 7524544 (-) |
