G220241


Basic Information

Item Value
gene id G220241
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 7081823 ~ 7084303 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU251281
CTTgatttatgtaaatgtatttattattatcagcACATAAATGTACACTTACTGAATGTGCTTGGGTTGATATAAGGTCCCACTTTAGTACAaactttttaatattttttttaaaggcaacaTGCATCATCATTAACCTTGACACAACAAAGATAAAGAAAGCCCTGTTCAACTGTTTTGAGTATGGCGATACAAAAAAAACCTAGAGGTAATTTGAGGTTACAGTTTGCACAACTATTATATTAAAAGGAGCCATTGTCAACAGGTCAACGCCAGGGTATCGATTATGTTTACTGTGTAAATGTTCATTTCTTCTTCTCATCGTCTTTGTCTTTCTTGCTGTCAGGTTTGGATCCTGTCTGTGAGGCCAGCGAGCCCATGGCATTCCGGATGGCCTCGTTGTTGGGGTCGACACCCGGTAGGTTCTCCAGGACGCTCTGGAGGAACTCTGGGTCCTGCATCACATCAGCATCTTGCTGGGCCTGAAGTCTGGTGGGGAGGAAGTCTCCATTCCTCATATACTCACTGTTGTCCACACTGAGgcacacagacaacacagtacATACATACGTTACACAGTGTAGCATGTAGGCCAGGGAGGGGCAACTCTAGTCCTCAGGGGCCAGAGTTGtgtca

Function

NR:

description
26S proteasome non-ATPase regulatory subunit 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251281 True 636 lncRNA 0.47 2 7081823 7084303

Neighbor

gene id symbol gene type direction distance location
LOC110508339 NA coding downstream 87978 6988898 ~ 6993845 (-)
zgc:174935 LOC106605997 coding downstream 102634 6976163 ~ 6979189 (-)
LOC118944481 LOC106575260 coding downstream 127949 6953156 ~ 6953874 (-)
LOC118964351 LOC106605995 coding downstream 129454 6948445 ~ 6952369 (-)
LOC110508304 gtpbp10 coding downstream 149162 6929457 ~ 6932661 (-)
il6r il6ra coding upstream 123618 7158585 ~ 7220080 (-)
LOC110520786 atp8b2 coding upstream 137693 7221996 ~ 7320978 (-)
LOC118945273 NA coding upstream 139823 7224126 ~ 7226076 (-)
LOC110536068 LOC106595411 coding upstream 238733 7323036 ~ 7343283 (-)
LOC110537383 LOC105024478 coding upstream 281114 7365417 ~ 7394499 (-)
G220253 LOC106575371 non-coding downstream 8253 7073142 ~ 7073570 (-)
G220229 LOC100135938 non-coding downstream 19992 7019976 ~ 7061831 (-)
G220226 NA non-coding downstream 65114 7016495 ~ 7016709 (-)
G220222 NA non-coding downstream 80344 7000432 ~ 7001479 (-)
G220217 NA non-coding downstream 92950 6988327 ~ 6988873 (-)
G220265 NA non-coding upstream 21633 7105936 ~ 7106163 (-)
G220270 NA non-coding upstream 28688 7112991 ~ 7113723 (-)
G220272 NA non-coding upstream 31300 7115603 ~ 7115892 (-)
G220278 NA non-coding upstream 34179 7118482 ~ 7118720 (-)
G220281 NA non-coding upstream 35984 7120287 ~ 7120503 (-)
G220209 LOC105030512 other downstream 111323 6967081 ~ 6970500 (-)
G220202 LOC106605995 other downstream 128860 6952559 ~ 6952963 (-)
G220261 NA other upstream 15035 7099338 ~ 7100170 (-)
G220751 NA other upstream 92089 7176392 ~ 7201421 (-)
LOC110520792 LOC106575505 other upstream 344367 7408252 ~ 7436195 (-)
LOC110508454 s10ag other upstream 432897 7517195 ~ 7524544 (-)
LOC110508472 LOC106573847 other upstream 443723 7528026 ~ 7530317 (-)

Expression


Co-expression Network