G220185


Basic Information

Item Value
gene id G220185
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 7103755 ~ 7103963 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU251190
CAGTAGTTTATTGGCCAGTGTTTTGGCCTGGGTCAGACCCCACTTCACCTCTGACCCCAGTGACATCAGGGTGTCCTTGAGGGCGTCGGGGGAGAActgggagagatggaaaggggaAAGCAGCGTAACACCGGGACCCAGCGCACGCAGCAGCTCAGGACTGGAAACATCCAcagataatgacatcacagtgttgaagagcttcttct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251190 True 209 lncRNA 0.55 1 7103755 7103963

Neighbor

gene id symbol gene type direction distance location
LOC110508380 LOC105029226 coding upstream 4850 7084606 ~ 7098905 (+)
LOC110508390 LOC100194679 coding upstream 19441 7080450 ~ 7084314 (+)
LOC110508369 LOC106575371 coding upstream 24273 7063618 ~ 7079482 (+)
LOC100135938 LOC106575366 coding upstream 41923 7046735 ~ 7061832 (+)
LOC110520784 LOC106575322 coding upstream 58539 7016691 ~ 7045216 (+)
LOC110508400 NA coding downstream 6019 7109982 ~ 7113781 (+)
LOC110508415 LOC106605928 coding downstream 57987 7161950 ~ 7170443 (+)
LOC110536044 LOC106575458 coding downstream 244168 7348131 ~ 7357408 (+)
LOC118945274 LOC106575512 coding downstream 333048 7437011 ~ 7447882 (+)
LOC110508431 LOC106575520 coding downstream 356477 7460440 ~ 7500537 (+)
G220184 NA non-coding upstream 487 7102298 ~ 7103268 (+)
G220178 NA non-coding upstream 23853 7079680 ~ 7079902 (+)
LOC110508323 LOC106575347 non-coding upstream 115306 6979131 ~ 6988449 (+)
G220125 NA non-coding upstream 126288 6977004 ~ 6977467 (+)
G220186 NA non-coding downstream 725 7104688 ~ 7104965 (+)
G220189 NA non-coding downstream 4002 7107965 ~ 7108182 (+)
G220273 NA non-coding downstream 12099 7116062 ~ 7116373 (+)
G220275 NA non-coding downstream 13524 7117487 ~ 7117755 (+)
LOC110520781 osgin2 other upstream 158776 6937600 ~ 6947976 (+)
LOC110507732 LOC106576036 other upstream 296085 6794547 ~ 6811294 (+)
G218971 NA other upstream 384592 6717628 ~ 6719163 (+)
LOC110507851 acbd7 other upstream 472154 6624575 ~ 6631601 (+)
G220435 NA other downstream 255705 7359668 ~ 7365285 (+)
G220445 LOC106575489 other downstream 274295 7378258 ~ 7381563 (+)
LOC110520790 LOC106606111 other downstream 1066744 8170634 ~ 8178058 (+)

Expression


Co-expression Network