G220272



Basic Information


Item Value
gene id G220272
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 7115603 ~ 7115892 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU251318
attgactgtgcctttaaacagttcttgcttgtttgtaggtgaccaaatacttattttgcaccatcatttgcaaataaattcataaaaaatcctacaatgtgattttctggattttttttactcattttgtctgtcatagttgaagtgtacctatgatgaaaattacaggcctctcatctttttaagtgggagaacttgcacaattggtggctgactaaatacttttttgccccactgtatttcaaggcctaccttgaaaatcagtgcctctttgcttgacatcataggaa

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU251318 True 290 lncRNA 0.35 1 7115603 7115892

Neighbor


gene id symbol gene type direction distance location
LOC110508339 NA coding downstream 121758 6988898 ~ 6993845 (-)
zgc:174935 LOC106605997 coding downstream 136414 6976163 ~ 6979189 (-)
LOC118944481 LOC106575260 coding downstream 161729 6953156 ~ 6953874 (-)
LOC118964351 LOC106605995 coding downstream 163234 6948445 ~ 6952369 (-)
LOC110508304 gtpbp10 coding downstream 182942 6929457 ~ 6932661 (-)
il6r il6ra coding upstream 92029 7158585 ~ 7220080 (-)
LOC110520786 atp8b2 coding upstream 106104 7221996 ~ 7320978 (-)
LOC118945273 NA coding upstream 108234 7224126 ~ 7226076 (-)
LOC110536068 LOC106595411 coding upstream 207144 7323036 ~ 7343283 (-)
LOC110537383 LOC105024478 coding upstream 249525 7365417 ~ 7394499 (-)
G220270 NA non-coding downstream 1880 7112991 ~ 7113723 (-)
G220265 NA non-coding downstream 9440 7105936 ~ 7106163 (-)
G220241 NA non-coding downstream 31300 7081823 ~ 7084303 (-)
G220242 LOC100194679 non-coding downstream 31912 7082745 ~ 7083691 (-)
G220253 LOC106575371 non-coding downstream 42033 7073142 ~ 7073570 (-)
G220278 NA non-coding upstream 2590 7118482 ~ 7118720 (-)
G220281 NA non-coding upstream 4395 7120287 ~ 7120503 (-)
G220722 NA non-coding upstream 38853 7154745 ~ 7155223 (-)
G220778 NA non-coding upstream 152585 7268477 ~ 7269155 (-)
G220261 NA other downstream 15433 7099338 ~ 7100170 (-)
G220229 LOC100135938 other downstream 53772 7019976 ~ 7061831 (-)
G220209 LOC105030512 other downstream 145103 6967081 ~ 6970500 (-)
G220751 NA other upstream 60500 7176392 ~ 7201421 (-)
LOC110520792 LOC106575505 other upstream 312778 7408252 ~ 7436195 (-)
LOC110508454 s10ag other upstream 401308 7517195 ~ 7524544 (-)
LOC110508472 LOC106573847 other upstream 412134 7528026 ~ 7530317 (-)
LOC110508494 LOC106575071 other upstream 440495 7554786 ~ 7573519 (-)

Expression



Co-expression Network