G220273


Basic Information

Item Value
gene id G220273
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 7116062 ~ 7116373 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU251319
tgaaaaacgagttttaatggctccaatctaagtgtatgtaaacttcctacttcaaatcaatttatatagcctttcgtacatcagctgatatctcaaagtgctgtacagaaacccagcctgaaaccccaaacagcaagcaatgcaggctcggaaaaactccctagaaaggccaaaacctaggaagaaacctagagaggaaccaggctatgaggggtggccagtcctcttctggctgtaccgggtggagattataacagaacatggccaagatgttcaaatgttcataaatgaccagcatggtcaaataataat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251319 True 312 lncRNA 0.37 1 7116062 7116373

Neighbor

gene id symbol gene type direction distance location
LOC110508400 NA coding upstream 2281 7109982 ~ 7113781 (+)
LOC110508380 LOC105029226 coding upstream 17157 7084606 ~ 7098905 (+)
LOC110508390 LOC100194679 coding upstream 31748 7080450 ~ 7084314 (+)
LOC110508369 LOC106575371 coding upstream 36580 7063618 ~ 7079482 (+)
LOC100135938 LOC106575366 coding upstream 54230 7046735 ~ 7061832 (+)
LOC110508415 LOC106605928 coding downstream 45577 7161950 ~ 7170443 (+)
LOC110536044 LOC106575458 coding downstream 231758 7348131 ~ 7357408 (+)
LOC118945274 LOC106575512 coding downstream 320638 7437011 ~ 7447882 (+)
LOC110508431 LOC106575520 coding downstream 344067 7460440 ~ 7500537 (+)
LOC110508507 LOC106575080 coding downstream 501995 7618368 ~ 7627967 (+)
G220189 NA non-coding upstream 7880 7107965 ~ 7108182 (+)
G220186 NA non-coding upstream 11097 7104688 ~ 7104965 (+)
G220185 NA non-coding upstream 12099 7103755 ~ 7103963 (+)
G220184 NA non-coding upstream 12794 7102298 ~ 7103268 (+)
G220275 NA non-coding downstream 1114 7117487 ~ 7117755 (+)
G220352 NA non-coding downstream 92749 7209122 ~ 7228957 (+)
G220355 NA non-coding downstream 111638 7228011 ~ 7228357 (+)
G220350 LOC106595355 non-coding downstream 112040 7228413 ~ 7237728 (+)
LOC110508323 LOC106575347 other upstream 129540 6979131 ~ 6988449 (+)
LOC110520781 osgin2 other upstream 171083 6937600 ~ 6947976 (+)
LOC110507732 LOC106576036 other upstream 308392 6794547 ~ 6811294 (+)
G218971 NA other upstream 396899 6717628 ~ 6719163 (+)
LOC110507851 acbd7 other upstream 484461 6624575 ~ 6631601 (+)
G220435 NA other downstream 243295 7359668 ~ 7365285 (+)
G220445 LOC106575489 other downstream 261885 7378258 ~ 7381563 (+)
LOC110520790 LOC106606111 other downstream 1054334 8170634 ~ 8178058 (+)

Expression


Co-expression Network