G220722



Basic Information


Item Value
gene id G220722
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 7154745 ~ 7155223 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU251860
ctagagcatgtttatcagaccatgagacatctgcggtgaaaggtggcagagctagagcatgtttatcagaccatgagacatctgtggtgaaaggtggcagagctagagcatgtttatcagaccatgagacatctgtggtgaaaggtggcagagctagagcatgtttatcagaccatgagacatctgcggtgaaaggtggcagagctagagcatgtttatcagaccatgagacatctgcggtgaaaggtggcagagctagagcatgtttatcagac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU251860 True 275 lncRNA 0.50 2 7154745 7155223

Neighbor


gene id symbol gene type direction distance location
LOC110508339 NA coding downstream 160900 6988898 ~ 6993845 (-)
zgc:174935 LOC106605997 coding downstream 175556 6976163 ~ 6979189 (-)
LOC118944481 LOC106575260 coding downstream 200871 6953156 ~ 6953874 (-)
LOC118964351 LOC106605995 coding downstream 202376 6948445 ~ 6952369 (-)
LOC110508304 gtpbp10 coding downstream 222084 6929457 ~ 6932661 (-)
il6r il6ra coding upstream 52698 7158585 ~ 7220080 (-)
LOC110520786 atp8b2 coding upstream 66773 7221996 ~ 7320978 (-)
LOC118945273 NA coding upstream 68903 7224126 ~ 7226076 (-)
LOC110536068 LOC106595411 coding upstream 167813 7323036 ~ 7343283 (-)
LOC110537383 LOC105024478 coding upstream 210194 7365417 ~ 7394499 (-)
G220281 NA non-coding downstream 34242 7120287 ~ 7120503 (-)
G220278 NA non-coding downstream 36025 7118482 ~ 7118720 (-)
G220272 NA non-coding downstream 38853 7115603 ~ 7115892 (-)
G220270 NA non-coding downstream 41022 7112991 ~ 7113723 (-)
G220265 NA non-coding downstream 48582 7105936 ~ 7106163 (-)
G220778 NA non-coding upstream 113254 7268477 ~ 7269155 (-)
G220786 NA non-coding upstream 125823 7281046 ~ 7283889 (-)
G220790 NA non-coding upstream 135643 7290866 ~ 7291132 (-)
G220791 NA non-coding upstream 136074 7291297 ~ 7291551 (-)
G220261 NA other downstream 54575 7099338 ~ 7100170 (-)
G220242 LOC100194679 other downstream 71054 7082745 ~ 7083691 (-)
G220229 LOC100135938 other downstream 92914 7019976 ~ 7061831 (-)
G220209 LOC105030512 other downstream 184245 6967081 ~ 6970500 (-)
G220751 NA other upstream 21169 7176392 ~ 7201421 (-)
LOC110520792 LOC106575505 other upstream 273447 7408252 ~ 7436195 (-)
LOC110508454 s10ag other upstream 361977 7517195 ~ 7524544 (-)
LOC110508472 LOC106573847 other upstream 372803 7528026 ~ 7530317 (-)
LOC110508494 LOC106575071 other upstream 401164 7554786 ~ 7573519 (-)

Expression



Co-expression Network