G220350 (LOC106595355)


Basic Information

Item Value
gene id G220350
gene name LOC106595355
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 7228413 ~ 7237728 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU251414
GTGGCCAGAAGCATATTGTTCTTACCGTATCAGAGAGCTGTGAGTGTGGCCAGAAGCATATTGTTCTCACCGTATCAGAGAGCTGTGAGTGTGGCCAGAAGCATATTGTTCTCACCGTATCAGAGAGCTGTGGTTTCAGGTCCAGTTTGAGGAATCGGAAAGCCAGAACTGGAACGATGCAGATCACTGTGGCCAAGACGATGGTCAGCCACACCAGCGGCTGGACCAGTGTGCTCTGGGCACTGCCAACGAAGTGGAACTGGTTGGGAAAGATGCTGAATAGAGTCTGGCTGTGCATAGCCAACATGATGGTGAAGAAGGAGCCCACAGAGCCCCACACAAAGAAATGGTTGATGGCTGTCCAGTAGCCTGTGTCCagagcaatctacacacacacgcacgcacacacacacacacacacacacacacacacacacacagacacacacacactcacacacactcacacacttgtatgcgtgcacacaaacacacatgcacgcacacatacatacacacaattgTGAAAGGCATGGTGAGGCGTGAGAAAAGAGGACGTAAGGAGAGAGAACTACACGTAAACAGATAAAGTGGGGATTCTGGGGACTTTCCATGACCTTACAAATAGACTGTGCTGCCAGAGCactttgcttcaatatatctccTCCTTCCCCTTATCTCTCAATTCTTCCCATCTCTGTTATCATCTTTGCCAAGCACTTCTGTCACTCGCCCTTCCTCCAACCCTCCTCTgacatcctctcctccatccccctctctctctaactcactcTTGATCATGCTAACATCATTAGCCCCGTCTCCTATGGCCAGGGTGACAGCTTTCTTGTGTTTCTTGATGAGCTCCACCACCAGGGCTTTCTGTAGAGGAGTCACCCTGCAGCAGATCACTGCTCTACAGACACACGCTGTTGACACAAACTCCCCCTCCATATCAGCCTCCAACGCATGGgcctgacacagagagagagagagagagagagagagggagggggggagagagagagggagagagaggtagagagagagagggagagagagagggagggagagggagagagtgagg

Function

NR:

description
PREDICTED: phospholipid-transporting ATPase ID-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251414 True 1087 lncRNA 0.51 2 7228413 7237728

Neighbor

gene id symbol gene type direction distance location
LOC110508415 LOC106605928 coding upstream 57970 7161950 ~ 7170443 (+)
LOC110508400 NA coding upstream 114632 7109982 ~ 7113781 (+)
LOC110508380 LOC105029226 coding upstream 129508 7084606 ~ 7098905 (+)
LOC110508390 LOC100194679 coding upstream 144099 7080450 ~ 7084314 (+)
LOC110508369 LOC106575371 coding upstream 148931 7063618 ~ 7079482 (+)
LOC110536044 LOC106575458 coding downstream 110403 7348131 ~ 7357408 (+)
LOC118945274 LOC106575512 coding downstream 199283 7437011 ~ 7447882 (+)
LOC110508431 LOC106575520 coding downstream 222712 7460440 ~ 7500537 (+)
LOC110508507 LOC106575080 coding downstream 380640 7618368 ~ 7627967 (+)
LOC110513974 efna3 coding downstream 703574 7941302 ~ 8086452 (+)
G220355 NA non-coding upstream 56 7228011 ~ 7228357 (+)
G220275 NA non-coding upstream 110658 7117487 ~ 7117755 (+)
G220273 NA non-coding upstream 112040 7116062 ~ 7116373 (+)
G220359 NA non-coding downstream 8734 7246462 ~ 7249188 (+)
G220361 NA non-coding downstream 12336 7250064 ~ 7251514 (+)
G220364 NA non-coding downstream 17490 7255218 ~ 7256012 (+)
G220368 atp8b2 non-coding downstream 21807 7259535 ~ 7264660 (+)
G220395 NA non-coding downstream 62948 7300676 ~ 7300897 (+)
LOC110508323 LOC106575347 other upstream 241891 6979131 ~ 6988449 (+)
LOC110520781 osgin2 other upstream 283434 6937600 ~ 6947976 (+)
LOC110507732 LOC106576036 other upstream 420743 6794547 ~ 6811294 (+)
G218971 NA other upstream 509250 6717628 ~ 6719163 (+)
LOC110507851 acbd7 other upstream 596812 6624575 ~ 6631601 (+)
G220435 NA other downstream 121940 7359668 ~ 7365285 (+)
G220445 LOC106575489 other downstream 140530 7378258 ~ 7381563 (+)
LOC110520790 LOC106606111 other downstream 932979 8170634 ~ 8178058 (+)

Expression


Co-expression Network