G220778



Basic Information


Item Value
gene id G220778
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 7268477 ~ 7269155 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU251930
atctaggtgAGATAATGATGgagagaacactgtactgtatctaggtgagatgatgatggagagaacactgtactgtatctaggtgAGATGATGATGGAtagaacactgtactgtatctaggtgagatgatgatggagagaacactgtactgtatctaggtgagatgatgatggagagaacactgtactgtatctaggtgAGATGATGATGGAtagaacactgtactgtatctaggtgagatgatgatggagagaacactgtactgtacctaggtgagatgatgatggagagaacactgt

Function


GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU251930 True 299 lncRNA 0.41 2 7268477 7269155

Neighbor


gene id symbol gene type direction distance location
LOC118945273 NA coding downstream 42401 7224126 ~ 7226076 (-)
il6r il6ra coding downstream 48397 7158585 ~ 7220080 (-)
LOC110508339 NA coding downstream 274632 6988898 ~ 6993845 (-)
zgc:174935 LOC106605997 coding downstream 289288 6976163 ~ 6979189 (-)
LOC118944481 LOC106575260 coding downstream 314603 6953156 ~ 6953874 (-)
LOC110536068 LOC106595411 coding upstream 53881 7323036 ~ 7343283 (-)
LOC110537383 LOC105024478 coding upstream 96262 7365417 ~ 7394499 (-)
LOC110520792 LOC106575505 coding upstream 139097 7408252 ~ 7436195 (-)
LOC110508441 LOC106575525 coding upstream 237046 7506201 ~ 7510860 (-)
LOC110508454 s10ag coding upstream 248040 7517195 ~ 7524544 (-)
G220722 NA non-coding downstream 113254 7154745 ~ 7155223 (-)
G220281 NA non-coding downstream 147974 7120287 ~ 7120503 (-)
G220278 NA non-coding downstream 149757 7118482 ~ 7118720 (-)
G220272 NA non-coding downstream 152585 7115603 ~ 7115892 (-)
G220786 NA non-coding upstream 11891 7281046 ~ 7283889 (-)
G220790 NA non-coding upstream 21711 7290866 ~ 7291132 (-)
G220791 NA non-coding upstream 22142 7291297 ~ 7291551 (-)
G220792 NA non-coding upstream 22682 7291837 ~ 7292049 (-)
G220794 NA non-coding upstream 29010 7298165 ~ 7298402 (-)
G220751 NA other downstream 67056 7176392 ~ 7201421 (-)
G220261 NA other downstream 168307 7099338 ~ 7100170 (-)
G220242 LOC100194679 other downstream 184786 7082745 ~ 7083691 (-)
G220229 LOC100135938 other downstream 206646 7019976 ~ 7061831 (-)
LOC110508472 LOC106573847 other upstream 258871 7528026 ~ 7530317 (-)
LOC110508494 LOC106575071 other upstream 287232 7554786 ~ 7573519 (-)
G221788 LOC106574877 other upstream 1080164 8345683 ~ 8350289 (-)

Expression



Co-expression Network