G220432


Basic Information

Item Value
gene id G220432
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 7348838 ~ 7349576 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU251510
CAGCAATCCACGCCTTGGTTTTATTTCCCTTGCTTTGGTTTTGTTTCCAAATGCTAATTTTTTAGCACTTGTGGCACATACCCCATTCAATGGGACCGATGCTTTTTTGCGCATCACGTCCAAATCATCCGAAAGTATCTCAAAATGGTTCTGAAGCTCATCGAAGTCACTTCTAGATGATTTGAACATGCTAAATGGGATTTGTGTCACTAATGAATTTgcaaacagtgccagggaaacttAACTAAAGCATTGATTTCGGTCAtaccatagactgcttacagggtattGACACCAaaatgtcattttgtaattttggTGAACTAAGAATGTATCTATTGTGGACAGGGTTTACGTGAGATTTTAGgttcaaaacgttttgcaacggaatcCGACTAATGAATACCCCCAAGTGGAAGTGCATTCTCTAGATAGAGATGGTGCAACTGTGTAATCACCTGCAACTAATCATAAAACAATAATTCAAAGGGACCAATAAGATGACAGTTACAAATCATATGATTACTGTAGTTGACTTTATGGAGGCCCCTCCACCCGGTTACAGTACATGCAAGCTGTGTCAgtgtatgctgaacaaaaatataaacgcaacaatttcaaagatttgactgagttacagttcatattgggaatacagatatacatctgttggtcacaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251510 True 680 lncRNA 0.43 2 7348838 7349576

Neighbor

gene id symbol gene type direction distance location
LOC110508415 LOC106605928 coding upstream 178395 7161950 ~ 7170443 (+)
LOC110508400 NA coding upstream 235057 7109982 ~ 7113781 (+)
LOC110508380 LOC105029226 coding upstream 249933 7084606 ~ 7098905 (+)
LOC110508390 LOC100194679 coding upstream 264524 7080450 ~ 7084314 (+)
LOC110508369 LOC106575371 coding upstream 269356 7063618 ~ 7079482 (+)
LOC118945274 LOC106575512 coding downstream 87435 7437011 ~ 7447882 (+)
LOC110508431 LOC106575520 coding downstream 110864 7460440 ~ 7500537 (+)
LOC110508507 LOC106575080 coding downstream 268792 7618368 ~ 7627967 (+)
LOC110513974 efna3 coding downstream 591726 7941302 ~ 8086452 (+)
efna1b LOC106574320 coding downstream 798831 8148407 ~ 8159396 (+)
G220407 NA non-coding upstream 36796 7311639 ~ 7312042 (+)
G220406 NA non-coding upstream 37698 7310575 ~ 7311140 (+)
G220403 NA non-coding upstream 42543 7305933 ~ 7306295 (+)
G220395 NA non-coding upstream 47941 7300676 ~ 7300897 (+)
G220368 atp8b2 non-coding upstream 84178 7259535 ~ 7264660 (+)
LOC110536044 LOC106575458 non-coding downstream 5644 7348131 ~ 7357408 (+)
G220435 NA non-coding downstream 10092 7359668 ~ 7365285 (+)
G220437 NA non-coding downstream 15887 7365463 ~ 7366848 (+)
G220445 LOC106575489 non-coding downstream 28682 7378258 ~ 7381563 (+)
G220397 NA non-coding downstream 56864 7406440 ~ 7419394 (+)
LOC110508323 LOC106575347 other upstream 362316 6979131 ~ 6988449 (+)
LOC110520781 osgin2 other upstream 403859 6937600 ~ 6947976 (+)
LOC110507732 LOC106576036 other upstream 541168 6794547 ~ 6811294 (+)
G218971 NA other upstream 629675 6717628 ~ 6719163 (+)
LOC110507851 acbd7 other upstream 717237 6624575 ~ 6631601 (+)
LOC110520790 LOC106606111 other downstream 821131 8170634 ~ 8178058 (+)
G221299 s10i other downstream 1049495 8399071 ~ 8489067 (+)

Expression


Co-expression Network