Gene
RNA
| Item | Value |
|---|---|
| gene id | G220437 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 7365463 ~ 7366848 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: glycogenin-1 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU251523 | True | 838 | lncRNA | 0.40 | 2 | 7365463 | 7366848 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536044 | LOC106575458 | coding | upstream | 8055 | 7348131 ~ 7357408 (+) |
| LOC110508415 | LOC106605928 | coding | upstream | 195020 | 7161950 ~ 7170443 (+) |
| LOC110508400 | NA | coding | upstream | 251682 | 7109982 ~ 7113781 (+) |
| LOC110508380 | LOC105029226 | coding | upstream | 266558 | 7084606 ~ 7098905 (+) |
| LOC110508390 | LOC100194679 | coding | upstream | 281149 | 7080450 ~ 7084314 (+) |
| LOC118945274 | LOC106575512 | coding | downstream | 70163 | 7437011 ~ 7447882 (+) |
| LOC110508431 | LOC106575520 | coding | downstream | 93592 | 7460440 ~ 7500537 (+) |
| LOC110508507 | LOC106575080 | coding | downstream | 251520 | 7618368 ~ 7627967 (+) |
| LOC110513974 | efna3 | coding | downstream | 574454 | 7941302 ~ 8086452 (+) |
| efna1b | LOC106574320 | coding | downstream | 781559 | 8148407 ~ 8159396 (+) |
| G220435 | NA | non-coding | upstream | 178 | 7359668 ~ 7365285 (+) |
| G220432 | NA | non-coding | upstream | 15887 | 7348838 ~ 7349576 (+) |
| G220407 | NA | non-coding | upstream | 53421 | 7311639 ~ 7312042 (+) |
| G220406 | NA | non-coding | upstream | 54323 | 7310575 ~ 7311140 (+) |
| G220445 | LOC106575489 | non-coding | downstream | 11410 | 7378258 ~ 7381563 (+) |
| G220397 | NA | non-coding | downstream | 39592 | 7406440 ~ 7419394 (+) |
| G220463 | LOC106575505 | non-coding | downstream | 43494 | 7410342 ~ 7412750 (+) |
| G220466 | NA | non-coding | downstream | 47564 | 7414412 ~ 7417856 (+) |
| G220475 | LOC106575505 | non-coding | downstream | 61237 | 7428085 ~ 7429111 (+) |
| LOC110508323 | LOC106575347 | other | upstream | 378941 | 6979131 ~ 6988449 (+) |
| LOC110520781 | osgin2 | other | upstream | 420484 | 6937600 ~ 6947976 (+) |
| LOC110507732 | LOC106576036 | other | upstream | 557793 | 6794547 ~ 6811294 (+) |
| LOC110520790 | LOC106606111 | other | downstream | 803859 | 8170634 ~ 8178058 (+) |
| G221299 | s10i | other | downstream | 1032223 | 8399071 ~ 8489067 (+) |
| G221514 | NA | other | downstream | 1362129 | 8728977 ~ 8732478 (+) |
