Gene
RNA
| Item | Value |
|---|---|
| gene id | G220466 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 7414412 ~ 7417856 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: cingulin-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU251557 | True | 602 | lncRNA | 0.53 | 2 | 7414412 | 7417856 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536044 | LOC106575458 | coding | upstream | 57004 | 7348131 ~ 7357408 (+) |
| LOC110508415 | LOC106605928 | coding | upstream | 243969 | 7161950 ~ 7170443 (+) |
| LOC110508400 | NA | coding | upstream | 300631 | 7109982 ~ 7113781 (+) |
| LOC110508380 | LOC105029226 | coding | upstream | 315507 | 7084606 ~ 7098905 (+) |
| LOC110508390 | LOC100194679 | coding | upstream | 330098 | 7080450 ~ 7084314 (+) |
| LOC118945274 | LOC106575512 | coding | downstream | 19155 | 7437011 ~ 7447882 (+) |
| LOC110508431 | LOC106575520 | coding | downstream | 42584 | 7460440 ~ 7500537 (+) |
| LOC110508507 | LOC106575080 | coding | downstream | 200512 | 7618368 ~ 7627967 (+) |
| LOC110513974 | efna3 | coding | downstream | 523446 | 7941302 ~ 8086452 (+) |
| efna1b | LOC106574320 | coding | downstream | 730551 | 8148407 ~ 8159396 (+) |
| G220463 | LOC106575505 | non-coding | upstream | 1662 | 7410342 ~ 7412750 (+) |
| G220445 | LOC106575489 | non-coding | upstream | 35610 | 7378258 ~ 7381563 (+) |
| G220437 | NA | non-coding | upstream | 47564 | 7365463 ~ 7366848 (+) |
| G220435 | NA | non-coding | upstream | 49127 | 7359668 ~ 7365285 (+) |
| G220475 | LOC106575505 | non-coding | downstream | 10229 | 7428085 ~ 7429111 (+) |
| G220476 | NA | non-coding | downstream | 11788 | 7429644 ~ 7430128 (+) |
| G220513 | LOC106613263 | non-coding | downstream | 72298 | 7490154 ~ 7490423 (+) |
| G220518 | NA | non-coding | downstream | 77188 | 7495044 ~ 7495322 (+) |
| G220527 | NA | non-coding | downstream | 94195 | 7512051 ~ 7513038 (+) |
| LOC110508323 | LOC106575347 | other | upstream | 427890 | 6979131 ~ 6988449 (+) |
| LOC110520781 | osgin2 | other | upstream | 469433 | 6937600 ~ 6947976 (+) |
| LOC110520790 | LOC106606111 | other | downstream | 752851 | 8170634 ~ 8178058 (+) |
| G221299 | s10i | other | downstream | 981215 | 8399071 ~ 8489067 (+) |
| G221514 | NA | other | downstream | 1311121 | 8728977 ~ 8732478 (+) |
| LOC110520796 | fam189b | other | downstream | 1343478 | 8715996 ~ 8766590 (+) |
