G220518


Basic Information

Item Value
gene id G220518
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 7495044 ~ 7495322 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU251618
cgtccttgggtagacagagggaatctggaaggacatcaaggaatctttgtgttgtctgtgaatttatagcacgacttttgatgttccttggttggggtctgagcagattatttgttgcaattgcaagcgtaataaaatggtggtccgatagtccaagattatgaggaaaaacattaagatccacaacatttattccatgggacaaaactaggtccagcgtatgactgtgacagtgagtgggtccagagacatgttggacaaaacccactgagtcgatga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251618 True 279 lncRNA 0.42 1 7495044 7495322

Neighbor

gene id symbol gene type direction distance location
LOC118945274 LOC106575512 coding upstream 47162 7437011 ~ 7447882 (+)
LOC110536044 LOC106575458 coding upstream 137636 7348131 ~ 7357408 (+)
LOC110508415 LOC106605928 coding upstream 324601 7161950 ~ 7170443 (+)
LOC110508400 NA coding upstream 381263 7109982 ~ 7113781 (+)
LOC110508380 LOC105029226 coding upstream 396139 7084606 ~ 7098905 (+)
LOC110508507 LOC106575080 coding downstream 123046 7618368 ~ 7627967 (+)
LOC110513974 efna3 coding downstream 445980 7941302 ~ 8086452 (+)
efna1b LOC106574320 coding downstream 653085 8148407 ~ 8159396 (+)
LOC110520790 LOC106606111 coding downstream 675312 8170634 ~ 8178058 (+)
LOC110520877 LOC106574226 coding downstream 749906 8245228 ~ 8249653 (+)
G220513 LOC106613263 non-coding upstream 4621 7490154 ~ 7490423 (+)
G220476 NA non-coding upstream 64916 7429644 ~ 7430128 (+)
G220475 LOC106575505 non-coding upstream 65933 7428085 ~ 7429111 (+)
G220397 NA non-coding upstream 75650 7406440 ~ 7419394 (+)
G220527 NA non-coding downstream 16729 7512051 ~ 7513038 (+)
G220529 NA non-coding downstream 21005 7516327 ~ 7516551 (+)
G220510 NA non-coding downstream 21880 7517202 ~ 7524528 (+)
G220530 NA non-coding downstream 23654 7518976 ~ 7519671 (+)
G220542 NA non-coding downstream 36226 7531548 ~ 7532551 (+)
G220445 LOC106575489 other upstream 113481 7378258 ~ 7381563 (+)
G220435 NA other upstream 129759 7359668 ~ 7365285 (+)
LOC110508323 LOC106575347 other upstream 508522 6979131 ~ 6988449 (+)
G221299 s10i other downstream 903749 8399071 ~ 8489067 (+)
G221514 NA other downstream 1233655 8728977 ~ 8732478 (+)
LOC110520796 fam189b other downstream 1266012 8715996 ~ 8766590 (+)
LOC110520836 LOC106605888 other downstream 1278725 8772336 ~ 8800464 (+)

Expression


Co-expression Network