G220892



Basic Information


Item Value
gene id G220892
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 7498513 ~ 7502503 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU252068
TGAACTGAACCTACAACTTTATTGGACAGGAACAAAGCTGTGAGCGGTTATTGGAGGACAACGCTGTCCTCTGAGTGGGGAATGGAGaataacacagagacaaagatagagggacagaggagagagagacaagaagaagggacagaggagagagcaaCAATAAGAaaggacagatgagagagagacaagaagaaaggacagatgagagagagacaagaagaagggacagaggagagagcaaCAATAAGAaaggacagatgagagagagacaagaagaaaggacagatgagagagagacaagaagaaaggacagaggagagagagaacaagaaaaaAGGACAGAGATAACAAGGgaatgaaggggagagagagaacaagaagaaaggacagaggagcgagagaacaagaagaaaggacagaggagagagagaacaagaagaaaggacagaggagagagagaacaagaagaaaggacagaggagagagagaataagaataaaggacagaggagagagagaacaagaagaaaggacagaggagagagagaacaagaagaaaggacagaggagagagagacaagaagaatggacagaggagagagagacaagaagaaaggacagaggagagagagaacaagggaatgaaggggaaagagagaacaggggaatgaaggggagagaaggaagaaaagagaggggtggagaaacggggaggagggaggggatggacAGCACTCTGTTTGCGTCACACCTCTACAGCCAGGTCCtgaagggaaagagaggactCCACTCCACAGCTCTCTGATAGGCTTTACACACTCCTGGGGCTCTCCTGGACTACCCCACTGTGAAAAGCCTGTGTCCCACAGAGTGACGCAAGGTCATGTAAGGGGATCCCTCAGGATGGCAGTTAACACttggctggtctctctctctctctctccagggaagTAAGCTCTCTTGCACATTGCGTCGGACAGATATGATAATGCAGTGGGcaatgagtacacacacacacacacatcggacATTAAGTAATTGAAACTGGCCCATTACTGTAATAACTATAGGTGGCTTGTGTTCtgacaattataataataatacagcatTACACACTGGAGAGAGTCAGCTACAGAGCACAACACAatctgagagagggaggacaggaggcggaaggaggagaggagagagtcagctaCAGAGCACAAAACAatctgagagagggaggacaggaggcggaaggaggagaggagagagtcagctaCAGAGCACAACACAatctgagagagggaggacaggagggggaaggaggagaggagcgagggggaaggagggaaggacaggaggagaggacagaagggggaaggaggagaggagagagtcagctaCAGAGCACAACACAatctgagagagggaggacaggagggggaaggaggagaggagcgagggggaagaagggaaggacaggaggagaggacaggagggggaaggaggagaggacaggagggggaaggaggagaggagagagtcagctaCAGAGCACAACACAatctgagagagggaggacaggagggggaaggaggagaggagagagggggaaggaggagaggacagggggtaaggagggaggacaggtgggggaaggagggaggacaggtgggggatggagggggaaagaggagaggagcgagggagaaggaggggaggacaggagggggaaggaggggaggagagaaggggaaggaggagagggcagggggggaaggaggggaggacatgatgaggaaggaggagaggagagagggagaagaaggggaggacaggaggggggaggagagagggaggaaaggaagagaggacagagtgagACACTGTCTTACTCTGATAATGATAATCACAGTGATGACAGAAATTAACATTTGTGCAAACATTCATAACACACAATAGCTTACATTTTGTGAGAAAACATCCTTATTCCAACAATACATATCATCTGTCAGTTCTATATTCGACCACCCAATTTTGTGCAATCATGGCTCAACTGATCTGtactaatctgtcgttctgcccctgaacaggcagttaacccactgttcctaggccgtcattgaaaataagaatttgttcttaactgacttgcctagttaaataaagtttaaataaataaaaaaaactgtaaaaagaGGGAATTTACTCCATCTTGGCTCAACCCAATCTCAGTTTCCCAGGAACTTACTGAATCTAGACTCATCCCATTGCAACTGTACCCTATGGCACAATCTGCTATTATCCCAATAGAGCTGTATACGCAGACATCCTACACCTTTATCTTTCTCTAAGGTTGAATCCCAAATCACCCCCTGCCCCTTCACCCCCTGCCTCTCCACCTCTGCCATTTACACAAGTGTACTAAAGCTGAGGGAGTGAAAAATTATGGGGGTGTAGGGGCTAATTAGATCCTCCTATAGCCACTTCGACCTAGCCAGCACGGATGCAGGCTTCAGAGCGCAGTGCTATCCCGACACTCACTGCTATATGTCTGAAGTTAGCACAATTGAATTGTAAAAAATGGAGAGGCGTGTCTAATTATATACCACGTGCATGTGTTTATGTCTGATTCAGAGACTGGTCCCGGTGGGTTTATTGATCCCATCGACACTCTCTGGAAGTCACCCTCGGAGCTTCGTCAACAACACGTGACAACGGAGGGAGTTGGTATTGGCAAGGGGGCGGTTTGGGATTCACTATAACTACTTCATCTCATTCCATCTAACTCTCTGTcaatatccctctctctctttcatctctctccttcacgATCTGTCTCTTCTACTCATATAGTGTTAGCGTGCACGTCACAGGCTGTGTAGTACAGGTAATATCACATTCTTGTTTAAAAGCGTAGAGAATCATACAACAAACCACTGCACCCTACCTTTCTCTCAGGAAGACACAGAGAAATCGCAATAATATTATATTCAAAGCTATACTGTGGTACACTGCTAGGCTATGGtaaaatatactgtactgtactatcagTTGGCTTAACAGAAGTGGCTTGGAAAAACAATTATGAACCTTGACAACCCCCCACTTGCCTTTACATTTTCCCGATTGGTTGACACAGTTTCCAATCAAGGTTCTGTTACTGAAGCATTAAGTTCTGTACCAGTTGAAGGTGCGACAATATACTCTCAGTAAGCTTGCACAGTCAGCTTGGAATGAAAAGCATTGATTGGCTGGCGTAGCGTTCTACAGGATGTCAAACAATTTAGAGATTGTCCTCTCTCCCACTGATTGGCTTCTGCTGCTTATCactcagagggagagaggagaggcataaCTCCACCTTCCTCTGGGAAAAAGGGAAGAGTTGTCCATCCATTTATCCCTCCTCTGGAAAAAAAAAAGATATTTCATACGATGTTGGTGTTAAGTTTAGTTCTTCAGTTCAGAACAGTTCAGTAGAAAGGCTATAAAGGTTAACAGGTGTGGCTCCTGTCCAATATAGTTCCACAGACTTAATAAAACCCACTTCCCCTGCTGGGCAGGTGCCTCCCTCCTGCCCCTGTCCTGCTGTGCTGATTGGGTCGGGGCGGTGTCCATCGATGCTGCTGGGCACCTGGTTGGTCAGCCATTGGTGTTGGTGATGGTCTTGGCAGTGTAGTTCTGGAACAGTGGCTGGAGGAACATCCCGACggttccagacacacacacaattataaaGATCCACAGGAAGAGACGGTCGATCACCATGGCAACATACTTCCAGTCCTC
>TU252069
TGAACTGAACCTACAACTTTATTGGACAGGAACAAAGCTGTGAGCGGTTATTGGAGGACAACGCTGTCCTCTGAGTGGGGAATGGAGaataacacagagacaaagatagagggacagaggagagagagacaagaagaagggacagaggagagagcaaCAATAAGAaaggacagatgagagagagacaagaagaaaggacagatgagagagagacaagaagaagggacagaggagagagcaaCAATAAGAaaggacagatgagagagagacaagaagaaaggacagatgagagagagacaagaagaaaggacagaggagagagagaacaagaaaaaAGGACAGAGATAACAAGGgaatgaaggggagagagagaacaagaagaaaggacagaggagcgagagaacaagaagaaaggacagaggagagagagaacaagaagaaaggacagaggagagagagaacaagaagaaaggacagaggagagagagaataagaataaaggacagaggagagagagaacaagaagaaaggacagaggagagagagaacaagaagaaaggacagaggagagagagacaagaagaatggacagaggagagagagacaagaagaaaggacagaggagagagagaacaagggaatgaaggggaaagagagaacaggggaatgaaggggagagaaggaagaaaagagaggggtggagaaacggggaggagggaggggatggacAGCACTCTGTTTGCGTCACACCTCTACAGCCAGGTCCtgaagggaaagagaggactCCACTCCACAGCTCTCTGATAGGCTTTACACACTCCTGGGGCTCTCCTGGACTACCCCACTGTGAAAAGCCTGTGTCCCACAGAGTGACGCAAGGTCATGTAAGGGGATCCCTCAGGATGGCAGTTAACACttggctggtctctctctctctctctccagggaagTAAGCTCTCTTGCACATTGCGTCGGACAGATATGATAATGCAGTGGGcaatgagtacacacacacacacacatcggacATTAAGTAATTGAAACTGGCCCATTACTGTAATAACTATAGGTGGCTTGTGTTCtgacaattataataataatacagcatTACACACTGGAGAGAGTCAGCTACAGAGCACAACACAatctgagagagggaggacaggaggcggaaggaggagaggagagagtcagctaCAGAGCACAAAACAatctgagagagggaggacaggaggcggaaggaggagaggagagagtcagctaCAGAGCACAACACAatctgagagagggaggacaggagggggaaggaggagaggagcgagggggaaggagggaaggacaggaggagaggacagaagggggaaggaggagaggagagagtcagctaCAGAGCACAACACAatctgagagagggaggacaggagggggaaggaggagaggagcgagggggaagaagggaaggacaggaggagaggacaggagggggaaggaggagaggacaggagggggaaggaggagaggagagagtcagctaCAGAGCACAACACAatctgagagagggaggacaggagggggaaggaggagaggagagagggggaaggaggagaggacagggggtaaggagggaggacaggtgggggaaggagggaggacaggtgggggatggagggggaaagaggagaggagcgagggagaaggaggggaggacaggagggggaaggaggggaggagagaaggggaaggaggagagggcagggggggaaggaggggaggacatgatgaggaaggaggagaggagagagggagaagaaggggaggacaggaggggggaggagagagggaggaaaggaagagaggacagagtgagACACTGTCTTACTCTGATAATGATAATCACAGTGATGACAGAAATTAACATTTGTGCAAACATTCATAACACACAATAGCTTACATTTTGTGAGAAAACATCCTTATTCCAACAATACATATCATCTGTCAGTTCTATATTCGACCACCCAATTTTGTGCAATCATGGCTCAACTGATCTGtactaatctgtcgttctgcccctgaacaggcagttaacccactgttcctaggccgtcattgaaaataagaatttgttcttaactgacttgcctagttaaataaagtttaaataaataaaaaaaactgtaaaaagaGGGAATTTACTCCATCTTGGCTCAACCCAATCTCAGTTTCCCAGGAACTTACTGAATCTAGACTCATCCCATTGCAACTGTACCCTATGGCACAATCTGCTATTATCCCAATAGAGCTGTATACGCAGACATCCTACACCTTTATCTTTCTCTAAGGTTGAATCCCAAATCACCCCCTGCCCCTTCACCCCCTGCCTCTCCACCTCTGCCATTTACACAAGTGTACTAAAGCTGAGGGAGTGAAAAATTATGGGGGTGTAGGGGCTAATTAGATCCTCCTATAGCCACTTCGACCTAGCCAGCACGGATGCAGGCTTCAGAGCGCAGTGCTATCCCGACACTCACTGCTATATGTCTGAAGTTAGCACAATTGAATTGTAAAAAATGGAGAGGCGTGTCTAATTATATACCACGTGCATGTGTTTATGTCTGATTCAGAGACTGGTCCCGGTGGGTTTATTGATCCCATCGACACTCTCTGGAAGTCACCCTCGGAGCTTCGTCAACAACACGTGACAACGGAGGGAGTTGGTATTGGCAAGGGGGCGGTTTGGGATTCACTATAACTACTTCATCTCATTCCATCTAACTCTCTGTcaatatccctctctctctttcatctctctccttcacgATCTGTCTCTTCTACTCATATAGTGTTAGCGTGCACGTCACAGGCTGTGTAGTACAGGTAATATCACATTCTTGTTTAAAAGCGTAGAGAATCATACAACAAACCACTGCACCCTACCTTTCTCTCAGGAAGACACAGAGAAATCGCAATAATATTATATTCAAAGCTATACTGTGGTACACTGCTAGGCTATGGtaaaatatactgtactgtactatcagTTGGCTTAACAGAAGTGGCTTGGAAAAACAATTATGAACCTTGACAACCCCCCACTTGCCTTTACATTTTCCCGATTGGTTGACACAGTTTCCAATCAAGGTTCTGTTACTGAAGCATTAAGTTCTGTACCAGTTGAAGGTGCGACAATATACTCTCAGTAAGCTTGCACAGTCAGCTTGGAATGAAAAGCATTGATTGGCTGGCGTAGCGTTCTACAGGATGTCAAACAATTTAGAGATTGTCCTCTCTCCCACTGATTGGCTTCTGCTGCTTATCactcagagggagagaggagaggcataaCTCCACCTTCCTCTGGGAAAAAGGGAAGAGTTGTCCATCCATTTATCCCTCCTCTGGAAAAAAAAAAGATATTTCATACGATGTTGGTGTTAAGTTTAGTTCTTCAGTTCAGAACAGTTCAGTAGAAAGGCTATAAAGGTTAACAGGTGTGGCTCCTGTCCAATATAGTTCCACAGACTTAATAAAACCCACTTCCCCTGCTGGGCAGGTGCCTCCCTCCTGCCCCTGTCCTGCTGTGCTGATTGGGTCGGGGCGGTGTCCATCGATGCTGCTGGGCACCTGGTTGGTCAGCCATTGGTGTTGGTGATGGTCTTGGCAGTGTAGTTCTGGAACAGTGGCTGGAGGAACATCCCGACggttccagacacacacacaattataaaGATCCACAGGAAGAGACGGTCGATCACCATGGCAACATACTTCCAGTCCTC

Function


NR:

description
PREDICTED: neuronal acetylcholine receptor subunit beta-2-like, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU252068 False 3776 lncRNA 0.48 2 7498513 7502503
TU252069 True 3776 lncRNA 0.39 2 7498513 7502503
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Neighbor


gene id symbol gene type direction distance location
LOC110520792 LOC106575505 coding downstream 62318 7408252 ~ 7436195 (-)
LOC110537383 LOC105024478 coding downstream 104014 7365417 ~ 7394499 (-)
LOC110536068 LOC106595411 coding downstream 155230 7323036 ~ 7343283 (-)
LOC110520786 atp8b2 coding downstream 177535 7221996 ~ 7320978 (-)
LOC110508441 LOC106575525 coding upstream 3698 7506201 ~ 7510860 (-)
LOC110508454 s10ag coding upstream 14692 7517195 ~ 7524544 (-)
LOC110508472 LOC106573847 coding upstream 26024 7528026 ~ 7530317 (-)
LOC110508481 LOC106573839 coding upstream 29045 7531548 ~ 7552027 (-)
LOC110508494 LOC106575071 coding upstream 52283 7554786 ~ 7573519 (-)
G220889 NA non-coding downstream 3648 7494623 ~ 7494865 (-)
G220879 NA non-coding downstream 19045 7478146 ~ 7479468 (-)
G220797 NA non-coding downstream 90403 7406437 ~ 7408110 (-)
G220819 NA non-coding downstream 158652 7339207 ~ 7339861 (-)
G220729 NA non-coding downstream 179026 7314310 ~ 7319487 (-)
G220894 NA non-coding upstream 1830 7504333 ~ 7504614 (-)
G220908 NA non-coding upstream 32713 7535216 ~ 7535425 (-)
G220866 NA non-coding upstream 49679 7552182 ~ 7552852 (-)
G220751 NA other downstream 297092 7176392 ~ 7201421 (-)
G220261 NA other downstream 398343 7099338 ~ 7100170 (-)
G220242 LOC100194679 other downstream 414822 7082745 ~ 7083691 (-)
G220229 LOC100135938 other downstream 436682 7019976 ~ 7061831 (-)
G221788 LOC106574877 other upstream 846816 8345683 ~ 8350289 (-)
G221806 NA other upstream 891858 8394361 ~ 8410809 (-)

Expression


G220892 Expression in all Baseline Samples

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G220892 Expression in each Bioproject

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G220892 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 80.
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Co-expression Network