G220894



Basic Information


Item Value
gene id G220894
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 7504333 ~ 7504614 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU252072
ttcactaggtccccccgtgtggttctgggatttttgctcactgttcttgtgatcattttgaccccacggggtgagatcttgcgtggagccccagatcgagggagattatcagtggtcttgtatgtcttccatttcctaataattgatcccacagttgatttcttcaaaccaagctgcttacctattgcagattcagtcttcccagcctggtgcaggtctacaattttgtttctggtgtcctttgacagctctttggtcttggccatagtggagttgttatac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU252072 True 282 lncRNA 0.46 1 7504333 7504614

Neighbor


gene id symbol gene type direction distance location
LOC110520792 LOC106575505 coding downstream 68138 7408252 ~ 7436195 (-)
LOC110537383 LOC105024478 coding downstream 109834 7365417 ~ 7394499 (-)
LOC110536068 LOC106595411 coding downstream 161050 7323036 ~ 7343283 (-)
LOC110520786 atp8b2 coding downstream 183355 7221996 ~ 7320978 (-)
LOC110508441 LOC106575525 coding upstream 1587 7506201 ~ 7510860 (-)
LOC110508454 s10ag coding upstream 12581 7517195 ~ 7524544 (-)
LOC110508472 LOC106573847 coding upstream 23913 7528026 ~ 7530317 (-)
LOC110508481 LOC106573839 coding upstream 26934 7531548 ~ 7552027 (-)
LOC110508494 LOC106575071 coding upstream 50172 7554786 ~ 7573519 (-)
G220892 NA non-coding downstream 1830 7498513 ~ 7502503 (-)
G220889 NA non-coding downstream 9468 7494623 ~ 7494865 (-)
G220879 NA non-coding downstream 24865 7478146 ~ 7479468 (-)
G220797 NA non-coding downstream 96223 7406437 ~ 7408110 (-)
G220819 NA non-coding downstream 164472 7339207 ~ 7339861 (-)
G220908 NA non-coding upstream 30602 7535216 ~ 7535425 (-)
G220866 NA non-coding upstream 47568 7552182 ~ 7552852 (-)
G220922 NA non-coding upstream 84913 7589527 ~ 7591887 (-)
G220751 NA other downstream 302912 7176392 ~ 7201421 (-)
G220261 NA other downstream 404163 7099338 ~ 7100170 (-)
G220242 LOC100194679 other downstream 420642 7082745 ~ 7083691 (-)
G220229 LOC100135938 other downstream 442502 7019976 ~ 7061831 (-)
G221788 LOC106574877 other upstream 844705 8345683 ~ 8350289 (-)
G221806 NA other upstream 889747 8394361 ~ 8410809 (-)

Expression



Co-expression Network