XLOC_021820


Basic Information

Item Value
gene id XLOC_021820
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 33455563 ~ 33459265 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044857
AGACATTTGAGGCAGACCTTCACTTTGCAGAGTAATGAGGTCATTAATGCTCAATCGCATGGTCTCGAATGCACACACATATACCTAGACTGAccaagcaaaacatttttaatggcaGCCAATCAGTCAGAGCAGATCTTTGACCCTGTAGGACCTGACCCGTGCTTCTATGCTGAAATCTCACCAGATTGGTCAGTTGCGAGAGCTCTCCCTTGTGCGTGTCCCGCTTCTCAATGTGGTGTTCGTGCCCTGAATCTCGTACAGGAGGCTGCTCTGTTGAAGACTGCTGCAGCtgaagagagagaaacagagaaggGAACATTAAGTGGAAATTCACCACACACTTCTGGACACTGTGGACTCTGACATCACGGTTCAGTCTGTACTGACGCCCTCTGACTCAACGCTAACACTGAGCTGGGAGGGACACGTTGAGCTGGACGCAAGGGGCATTTTGCAACAGATGTCAGATTTTACTCAACTTCTCCATTGTGCAGAGCCATGCACTCCTCCAAACCAAGAAGTACGCCCTAAATGGCATGAGAAACTGAACAAACAGCTAATTCAGGGAAGAATTCAGCACAGTCCCAGATGCAACAGCAGTTTTGCGTTACCAATCCGCTAGACTTGGTCAGGACGTCCTCAAAATGGGCCGAAAGGGGTTTATCCAGGCTTCTAAAATGTCTTATAGCTGATTCCTGAAATCACATACTGCTTGAGagggtactacatttgaatttgatttaCCTTCATGACCAGTAGAAAAGCACATTTTATATCAGGGGTTATCAAACGtttcagcccgcaacccccaaaataacaatgccagtgacttgcgtaCCGCACTaccctctgaggtggttataaatatataaaccttgcacacaatGGCATACATAAACCAATAGGCTCAAGtctattcattatttaatttcggAGATCATCCTCTATGTTCAGCTGTGTCCTGTATTTACttttaatgtatgtgtgtgccataaaggtgtcagaaagtttaacctggtgccataaaatttTTGTCTTTAATCATTGTCTTCAATACAATGTAATCACCCCTGGGGGTGCaaaaaattgaaaggctgatgg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044857 True 1104 lncRNA 0.44 2 33455563 33459265

Neighbor

gene id symbol gene type direction distance location
XLOC_021819 rapgef3 coding upstream 11508 33381154 ~ 33444055 (+)
XLOC_021818 si:ch211-226m16.3 coding upstream 145941 33294633 ~ 33309622 (+)
XLOC_021817 dre-mir-205 coding upstream 165202 33290273 ~ 33290361 (+)
XLOC_021816 AL928610.1 coding upstream 336439 33119010 ~ 33119124 (+)
XLOC_021815 NA coding upstream 876129 32577050 ~ 32579434 (+)
XLOC_021821 CT027694.1 coding downstream 78786 33538051 ~ 33538169 (+)
XLOC_021822 dazap2 coding downstream 259337 33718602 ~ 33729552 (+)
XLOC_021823 si:ch211-210c8.6 coding downstream 293010 33752275 ~ 33757742 (+)
XLOC_021824 CR354542.1 coding downstream 300482 33759747 ~ 33760665 (+)
XLOC_021825 CR381531.2 coding downstream 318254 33777519 ~ 33901337 (+)
XLOC_021814 NA non-coding upstream 892749 32562610 ~ 32562814 (+)
XLOC_021812 NA non-coding upstream 967837 32480330 ~ 32487726 (+)
XLOC_021826 CR381531.1 non-coding downstream 369400 33828665 ~ 33830190 (+)
XLOC_021831 NA non-coding downstream 519446 33978711 ~ 33983432 (+)
XLOC_021833 AL954678.1 non-coding downstream 543492 34002757 ~ 34002873 (+)

Expression


Co-expression Network