Gene
RNA
| Item | Value |
|---|---|
| gene id | G220559 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 7557282 ~ 7557818 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| pre-B-cell leukemia transcription factor-interacting protein 1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU251676 | True | 401 | lncRNA | 0.40 | 2 | 7557282 | 7557818 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508431 | LOC106575520 | coding | upstream | 56745 | 7460440 ~ 7500537 (+) |
| LOC118945274 | LOC106575512 | coding | upstream | 109400 | 7437011 ~ 7447882 (+) |
| LOC110536044 | LOC106575458 | coding | upstream | 199874 | 7348131 ~ 7357408 (+) |
| LOC110508415 | LOC106605928 | coding | upstream | 386839 | 7161950 ~ 7170443 (+) |
| LOC110508400 | NA | coding | upstream | 443501 | 7109982 ~ 7113781 (+) |
| LOC110508507 | LOC106575080 | coding | downstream | 60550 | 7618368 ~ 7627967 (+) |
| LOC110513974 | efna3 | coding | downstream | 383484 | 7941302 ~ 8086452 (+) |
| efna1b | LOC106574320 | coding | downstream | 590589 | 8148407 ~ 8159396 (+) |
| LOC110520790 | LOC106606111 | coding | downstream | 612816 | 8170634 ~ 8178058 (+) |
| LOC110520877 | LOC106574226 | coding | downstream | 687410 | 8245228 ~ 8249653 (+) |
| G220548 | NA | non-coding | upstream | 4434 | 7552160 ~ 7552848 (+) |
| G220555 | NA | non-coding | upstream | 11870 | 7545203 ~ 7545412 (+) |
| G220545 | LOC106573876 | non-coding | upstream | 20139 | 7536660 ~ 7537143 (+) |
| G220542 | NA | non-coding | upstream | 24731 | 7531548 ~ 7532551 (+) |
| G220510 | NA | non-coding | upstream | 32754 | 7517202 ~ 7524528 (+) |
| G220565 | NA | non-coding | downstream | 16071 | 7573889 ~ 7574231 (+) |
| G220549 | NA | non-coding | downstream | 19252 | 7577070 ~ 7580334 (+) |
| G220552 | NA | non-coding | downstream | 42583 | 7600401 ~ 7605519 (+) |
| G220575 | NA | non-coding | downstream | 55845 | 7613663 ~ 7614792 (+) |
| G220576 | NA | non-coding | downstream | 59099 | 7616917 ~ 7617057 (+) |
| G220445 | LOC106575489 | other | upstream | 175719 | 7378258 ~ 7381563 (+) |
| G220435 | NA | other | upstream | 191997 | 7359668 ~ 7365285 (+) |
| LOC110508323 | LOC106575347 | other | upstream | 570760 | 6979131 ~ 6988449 (+) |
| G221299 | s10i | other | downstream | 841253 | 8399071 ~ 8489067 (+) |
| G221514 | NA | other | downstream | 1171159 | 8728977 ~ 8732478 (+) |
| LOC110520796 | fam189b | other | downstream | 1203516 | 8715996 ~ 8766590 (+) |
| LOC110520836 | LOC106605888 | other | downstream | 1216229 | 8772336 ~ 8800464 (+) |
