Item | Value |
---|---|
gene id | G220565 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048567.1 |
NCBI id | CM023221.2 |
chromosome length | 85311031 |
location | 7573889 ~ 7574231 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU251682 | True | 343 | lncRNA | 0.44 | 1 | 7573889 | 7574231 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110508431 | LOC106575520 | coding | upstream | 73352 | 7460440 ~ 7500537 (+) |
LOC118945274 | LOC106575512 | coding | upstream | 126007 | 7437011 ~ 7447882 (+) |
LOC110536044 | LOC106575458 | coding | upstream | 216481 | 7348131 ~ 7357408 (+) |
LOC110508415 | LOC106605928 | coding | upstream | 403446 | 7161950 ~ 7170443 (+) |
LOC110508400 | NA | coding | upstream | 460108 | 7109982 ~ 7113781 (+) |
LOC110508507 | LOC106575080 | coding | downstream | 44137 | 7618368 ~ 7627967 (+) |
LOC110513974 | efna3 | coding | downstream | 367071 | 7941302 ~ 8086452 (+) |
efna1b | LOC106574320 | coding | downstream | 574176 | 8148407 ~ 8159396 (+) |
LOC110520790 | LOC106606111 | coding | downstream | 596403 | 8170634 ~ 8178058 (+) |
LOC110520877 | LOC106574226 | coding | downstream | 670997 | 8245228 ~ 8249653 (+) |
G220559 | NA | non-coding | upstream | 16071 | 7557282 ~ 7557818 (+) |
G220548 | NA | non-coding | upstream | 21041 | 7552160 ~ 7552848 (+) |
G220555 | NA | non-coding | upstream | 28477 | 7545203 ~ 7545412 (+) |
G220545 | LOC106573876 | non-coding | upstream | 36746 | 7536660 ~ 7537143 (+) |
G220542 | NA | non-coding | upstream | 41338 | 7531548 ~ 7532551 (+) |
G220549 | NA | non-coding | downstream | 2839 | 7577070 ~ 7580334 (+) |
G220552 | NA | non-coding | downstream | 26170 | 7600401 ~ 7605519 (+) |
G220575 | NA | non-coding | downstream | 39432 | 7613663 ~ 7614792 (+) |
G220576 | NA | non-coding | downstream | 42686 | 7616917 ~ 7617057 (+) |
G220578 | NA | non-coding | downstream | 55033 | 7629264 ~ 7630255 (+) |
G220445 | LOC106575489 | other | upstream | 192326 | 7378258 ~ 7381563 (+) |
G220435 | NA | other | upstream | 208604 | 7359668 ~ 7365285 (+) |
LOC110508323 | LOC106575347 | other | upstream | 587367 | 6979131 ~ 6988449 (+) |
G221299 | s10i | other | downstream | 824840 | 8399071 ~ 8489067 (+) |
G221514 | NA | other | downstream | 1154746 | 8728977 ~ 8732478 (+) |
LOC110520796 | fam189b | other | downstream | 1187103 | 8715996 ~ 8766590 (+) |
LOC110520836 | LOC106605888 | other | downstream | 1199816 | 8772336 ~ 8800464 (+) |