Gene
RNA
| Item | Value |
|---|---|
| gene id | G220578 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 7629264 ~ 7630255 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU251699 | True | 992 | lncRNA | 0.48 | 1 | 7629264 | 7630255 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508507 | LOC106575080 | coding | upstream | 1297 | 7618368 ~ 7627967 (+) |
| LOC110508431 | LOC106575520 | coding | upstream | 128727 | 7460440 ~ 7500537 (+) |
| LOC118945274 | LOC106575512 | coding | upstream | 181382 | 7437011 ~ 7447882 (+) |
| LOC110536044 | LOC106575458 | coding | upstream | 271856 | 7348131 ~ 7357408 (+) |
| LOC110508415 | LOC106605928 | coding | upstream | 458821 | 7161950 ~ 7170443 (+) |
| LOC110513974 | efna3 | coding | downstream | 311047 | 7941302 ~ 8086452 (+) |
| efna1b | LOC106574320 | coding | downstream | 518152 | 8148407 ~ 8159396 (+) |
| LOC110520790 | LOC106606111 | coding | downstream | 540379 | 8170634 ~ 8178058 (+) |
| LOC110520877 | LOC106574226 | coding | downstream | 614973 | 8245228 ~ 8249653 (+) |
| krtcap2 | kcp2 | coding | downstream | 619498 | 8249753 ~ 8254163 (+) |
| G220576 | NA | non-coding | upstream | 12207 | 7616917 ~ 7617057 (+) |
| G220575 | NA | non-coding | upstream | 14472 | 7613663 ~ 7614792 (+) |
| G220552 | NA | non-coding | upstream | 23745 | 7600401 ~ 7605519 (+) |
| G220549 | NA | non-coding | upstream | 48930 | 7577070 ~ 7580334 (+) |
| G220565 | NA | non-coding | upstream | 55033 | 7573889 ~ 7574231 (+) |
| G220582 | NA | non-coding | downstream | 3663 | 7633918 ~ 7634120 (+) |
| G220581 | NA | non-coding | downstream | 5232 | 7635487 ~ 7636196 (+) |
| G220587 | NA | non-coding | downstream | 11386 | 7641641 ~ 7642008 (+) |
| G220588 | NA | non-coding | downstream | 11873 | 7642128 ~ 7642584 (+) |
| G220589 | NA | non-coding | downstream | 14199 | 7644454 ~ 7644661 (+) |
| G220445 | LOC106575489 | other | upstream | 247701 | 7378258 ~ 7381563 (+) |
| G220435 | NA | other | upstream | 263979 | 7359668 ~ 7365285 (+) |
| LOC110508323 | LOC106575347 | other | upstream | 642742 | 6979131 ~ 6988449 (+) |
| G221299 | s10i | other | downstream | 768816 | 8399071 ~ 8489067 (+) |
| G221514 | NA | other | downstream | 1098722 | 8728977 ~ 8732478 (+) |
| LOC110520796 | fam189b | other | downstream | 1131079 | 8715996 ~ 8766590 (+) |
| LOC110520836 | LOC106605888 | other | downstream | 1143792 | 8772336 ~ 8800464 (+) |
