G220589


Basic Information

Item Value
gene id G220589
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 7644454 ~ 7644661 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU251710
atatctaaggaagtctcgagctattgctcgactgaggtagagtatctcacgataagctgtagaccacactatctacctagagagttttcatctgtatttttggtAGCTGtcaacataccaccacagacactAAGACCccactgaatgagctgtattccgccataagcaaacaggaaaatgctcacccagaggtggcgctactagtagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU251710 True 208 lncRNA 0.45 1 7644454 7644661

Neighbor

gene id symbol gene type direction distance location
LOC110508507 LOC106575080 coding upstream 16487 7618368 ~ 7627967 (+)
LOC110508431 LOC106575520 coding upstream 143917 7460440 ~ 7500537 (+)
LOC118945274 LOC106575512 coding upstream 196572 7437011 ~ 7447882 (+)
LOC110536044 LOC106575458 coding upstream 287046 7348131 ~ 7357408 (+)
LOC110508415 LOC106605928 coding upstream 474011 7161950 ~ 7170443 (+)
LOC110513974 efna3 coding downstream 296641 7941302 ~ 8086452 (+)
efna1b LOC106574320 coding downstream 503746 8148407 ~ 8159396 (+)
LOC110520790 LOC106606111 coding downstream 525973 8170634 ~ 8178058 (+)
LOC110520877 LOC106574226 coding downstream 600567 8245228 ~ 8249653 (+)
krtcap2 kcp2 coding downstream 605092 8249753 ~ 8254163 (+)
G220588 NA non-coding upstream 1870 7642128 ~ 7642584 (+)
G220587 NA non-coding upstream 2446 7641641 ~ 7642008 (+)
G220581 NA non-coding upstream 8258 7635487 ~ 7636196 (+)
G220582 NA non-coding upstream 10334 7633918 ~ 7634120 (+)
G220578 NA non-coding upstream 14199 7629264 ~ 7630255 (+)
G220590 NA non-coding downstream 716 7645377 ~ 7645643 (+)
G220591 NA non-coding downstream 1362 7646023 ~ 7646310 (+)
G220592 NA non-coding downstream 2448 7647109 ~ 7647331 (+)
G220593 NA non-coding downstream 2729 7647390 ~ 7647602 (+)
G220595 NA non-coding downstream 4564 7649225 ~ 7649993 (+)
G220445 LOC106575489 other upstream 262891 7378258 ~ 7381563 (+)
G220435 NA other upstream 279169 7359668 ~ 7365285 (+)
LOC110508323 LOC106575347 other upstream 657932 6979131 ~ 6988449 (+)
G221299 s10i other downstream 754410 8399071 ~ 8489067 (+)
G221514 NA other downstream 1084316 8728977 ~ 8732478 (+)
LOC110520796 fam189b other downstream 1116673 8715996 ~ 8766590 (+)
LOC110520836 LOC106605888 other downstream 1129386 8772336 ~ 8800464 (+)

Expression


Co-expression Network