G220590


Basic Information

Item Value
gene id G220590
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 7645377 ~ 7645643 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU251711
gtgtatcaagaatggtccaccacccaaaggacatccagccaacttgacacgactttgggaagcattggagtcaacatgtagagtccatgccctgacgaattgagactgttctaaGGGTAAAAGGGGGCTCATGACCACACAATCCTGAAGAGACTGGGTCAGTATCTTGAAAACGCTGCTCCCAGAACCTTAGTGGTCAGAGGAGATTTCAACCCAGTGCTAGACCCTAAAAGTGACAGGAGCTCCACGTTAGATAATCATCAGCAC

Function

NR:

description
codanin-1 isoform X2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU251711 True 267 lncRNA 0.48 1 7645377 7645643

Neighbor

gene id symbol gene type direction distance location
LOC110508507 LOC106575080 coding upstream 17410 7618368 ~ 7627967 (+)
LOC110508431 LOC106575520 coding upstream 144840 7460440 ~ 7500537 (+)
LOC118945274 LOC106575512 coding upstream 197495 7437011 ~ 7447882 (+)
LOC110536044 LOC106575458 coding upstream 287969 7348131 ~ 7357408 (+)
LOC110508415 LOC106605928 coding upstream 474934 7161950 ~ 7170443 (+)
LOC110513974 efna3 coding downstream 295659 7941302 ~ 8086452 (+)
efna1b LOC106574320 coding downstream 502764 8148407 ~ 8159396 (+)
LOC110520790 LOC106606111 coding downstream 524991 8170634 ~ 8178058 (+)
LOC110520877 LOC106574226 coding downstream 599585 8245228 ~ 8249653 (+)
krtcap2 kcp2 coding downstream 604110 8249753 ~ 8254163 (+)
G220589 NA non-coding upstream 716 7644454 ~ 7644661 (+)
G220588 NA non-coding upstream 2793 7642128 ~ 7642584 (+)
G220587 NA non-coding upstream 3369 7641641 ~ 7642008 (+)
G220581 NA non-coding upstream 9181 7635487 ~ 7636196 (+)
G220582 NA non-coding upstream 11257 7633918 ~ 7634120 (+)
G220591 NA non-coding downstream 380 7646023 ~ 7646310 (+)
G220592 NA non-coding downstream 1466 7647109 ~ 7647331 (+)
G220593 NA non-coding downstream 1747 7647390 ~ 7647602 (+)
G220595 NA non-coding downstream 3582 7649225 ~ 7649993 (+)
G220600 NA non-coding downstream 17534 7663177 ~ 7746825 (+)
G220445 LOC106575489 other upstream 263814 7378258 ~ 7381563 (+)
G220435 NA other upstream 280092 7359668 ~ 7365285 (+)
LOC110508323 LOC106575347 other upstream 658855 6979131 ~ 6988449 (+)
G221299 s10i other downstream 753428 8399071 ~ 8489067 (+)
G221514 NA other downstream 1083334 8728977 ~ 8732478 (+)
LOC110520796 fam189b other downstream 1115691 8715996 ~ 8766590 (+)
LOC110520836 LOC106605888 other downstream 1128404 8772336 ~ 8800464 (+)

Expression


Co-expression Network