G220940



Basic Information


Item Value
gene id G220940
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 7646029 ~ 7646314 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU252128
CAATTCCTTCAGCACCTCTTGGATACTAGAAAGCTTTATGGGCTCCAGTTTCTCCATCAGGGAGGGCCAGTTTATTAACTGTAGCACTTTGTTAAAAGTAACAATGAAACTTCTGTCCTTACACCTTATTTTTGTGCTTCAGATGAAACATTATTTTGGAAAATACCAAGTAGTCAACATTAAAAAGGTGCTGGTTATTTTGGAAGAGCAAATGTTTTAATTGTTTAGATATTGATTGTATCCAAGCATTAGATTGTAATTTATCTTTAAGATCTCTGTCATTGGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU252128 True 286 lncRNA 0.34 1 7646029 7646314

Neighbor


gene id symbol gene type direction distance location
LOC110520788 LOC106593005 coding downstream 28836 7577008 ~ 7617193 (-)
LOC110508498 NA coding downstream 70415 7573853 ~ 7575614 (-)
LOC110508494 LOC106575071 coding downstream 72510 7554786 ~ 7573519 (-)
LOC110508481 LOC106573839 coding downstream 94002 7531548 ~ 7552027 (-)
LOC110508472 LOC106573847 coding downstream 115846 7528026 ~ 7530317 (-)
si:dkey-246i14.3 LOC106570832 coding upstream 98044 7744358 ~ 7840475 (-)
LOC110520794 LOC105024462 coding upstream 568278 8214332 ~ 8243743 (-)
LOC110520844 LOC106605887 coding upstream 820622 8466936 ~ 8495390 (-)
LOC110520892 LOC106605923 coding upstream 1052721 8699031 ~ 8703263 (-)
LOC118964373 NA coding upstream 1055149 8701463 ~ 8701598 (-)
G220939 NA non-coding downstream 749 7644746 ~ 7645280 (-)
G220938 NA non-coding downstream 2369 7643412 ~ 7643660 (-)
G220934 NA non-coding downstream 9907 7635449 ~ 7636122 (-)
G220933 NA non-coding downstream 11222 7634316 ~ 7634807 (-)
G220930 NA non-coding downstream 14657 7631052 ~ 7631372 (-)
G220941 NA non-coding upstream 668 7646982 ~ 7647321 (-)
G220942 NA non-coding upstream 2432 7648746 ~ 7649072 (-)
G220948 NA non-coding upstream 9743 7656057 ~ 7656318 (-)
G220956 NA non-coding upstream 28391 7674705 ~ 7741276 (-)
G220986 LOC106581475 non-coding upstream 71054 7717368 ~ 7824592 (-)
LOC110508454 s10ag other downstream 121537 7517195 ~ 7524544 (-)
LOC110520792 LOC106575505 other downstream 209858 7408252 ~ 7436195 (-)
G220751 NA other downstream 444608 7176392 ~ 7201421 (-)
G221788 LOC106574877 other upstream 703005 8345683 ~ 8350289 (-)
G221806 NA other upstream 748047 8394361 ~ 8410809 (-)
G221807 adar other upstream 856870 8503184 ~ 8523208 (-)
G221986 NA other upstream 1116805 8763119 ~ 8763884 (-)
LOC110520835 ash1l other upstream 1158383 8804651 ~ 8839679 (-)

Expression



Co-expression Network