G220948



Basic Information


Item Value
gene id G220948
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 7656057 ~ 7656318 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU252136
catttcaggcttcaaacataaagatatgaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcatgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU252136 True 262 lncRNA 0.53 1 7656057 7656318

Neighbor


gene id symbol gene type direction distance location
LOC110520788 LOC106593005 coding downstream 38864 7577008 ~ 7617193 (-)
LOC110508498 NA coding downstream 80443 7573853 ~ 7575614 (-)
LOC110508494 LOC106575071 coding downstream 82538 7554786 ~ 7573519 (-)
LOC110508481 LOC106573839 coding downstream 104030 7531548 ~ 7552027 (-)
LOC110508472 LOC106573847 coding downstream 125874 7528026 ~ 7530317 (-)
si:dkey-246i14.3 LOC106570832 coding upstream 88040 7744358 ~ 7840475 (-)
LOC110520794 LOC105024462 coding upstream 558274 8214332 ~ 8243743 (-)
LOC110520844 LOC106605887 coding upstream 810618 8466936 ~ 8495390 (-)
LOC110520892 LOC106605923 coding upstream 1042717 8699031 ~ 8703263 (-)
LOC118964373 NA coding upstream 1045145 8701463 ~ 8701598 (-)
G220942 NA non-coding downstream 6985 7648746 ~ 7649072 (-)
G220941 NA non-coding downstream 8736 7646982 ~ 7647321 (-)
G220940 NA non-coding downstream 9743 7646029 ~ 7646314 (-)
G220939 NA non-coding downstream 10777 7644746 ~ 7645280 (-)
G220938 NA non-coding downstream 12397 7643412 ~ 7643660 (-)
G220956 NA non-coding upstream 18387 7674705 ~ 7741276 (-)
G220986 LOC106581475 non-coding upstream 61050 7717368 ~ 7824592 (-)
G221009 NA non-coding upstream 91985 7748303 ~ 7756641 (-)
G221022 NA non-coding upstream 116608 7772926 ~ 7774540 (-)
LOC110508454 s10ag other downstream 131565 7517195 ~ 7524544 (-)
LOC110520792 LOC106575505 other downstream 219886 7408252 ~ 7436195 (-)
G220751 NA other downstream 454636 7176392 ~ 7201421 (-)
G221788 LOC106574877 other upstream 693001 8345683 ~ 8350289 (-)
G221806 NA other upstream 738043 8394361 ~ 8410809 (-)
G221807 adar other upstream 846866 8503184 ~ 8523208 (-)
G221986 NA other upstream 1106801 8763119 ~ 8763884 (-)
LOC110520835 ash1l other upstream 1148379 8804651 ~ 8839679 (-)

Expression



Co-expression Network