Gene
RNA
| Item | Value |
|---|---|
| gene id | G220600 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 7663177 ~ 7746825 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU251723 | False | 532 | lncRNA | 0.54 | 2 | 7663177 | 7746825 |
| TU251721 | True | 551 | lncRNA | 0.38 | 2 | 7684871 | 7746825 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508507 | LOC106575080 | coding | upstream | 35210 | 7618368 ~ 7627967 (+) |
| LOC110508431 | LOC106575520 | coding | upstream | 162640 | 7460440 ~ 7500537 (+) |
| LOC118945274 | LOC106575512 | coding | upstream | 215295 | 7437011 ~ 7447882 (+) |
| LOC110536044 | LOC106575458 | coding | upstream | 305769 | 7348131 ~ 7357408 (+) |
| LOC110508415 | LOC106605928 | coding | upstream | 492734 | 7161950 ~ 7170443 (+) |
| LOC110513974 | efna3 | coding | downstream | 194477 | 7941302 ~ 8086452 (+) |
| efna1b | LOC106574320 | coding | downstream | 401582 | 8148407 ~ 8159396 (+) |
| LOC110520790 | LOC106606111 | coding | downstream | 423809 | 8170634 ~ 8178058 (+) |
| LOC110520877 | LOC106574226 | coding | downstream | 498403 | 8245228 ~ 8249653 (+) |
| krtcap2 | kcp2 | coding | downstream | 502928 | 8249753 ~ 8254163 (+) |
| G220595 | NA | non-coding | upstream | 13184 | 7649225 ~ 7649993 (+) |
| G220593 | NA | non-coding | upstream | 15575 | 7647390 ~ 7647602 (+) |
| G220592 | NA | non-coding | upstream | 15846 | 7647109 ~ 7647331 (+) |
| G220591 | NA | non-coding | upstream | 16867 | 7646023 ~ 7646310 (+) |
| G220590 | NA | non-coding | upstream | 17534 | 7645377 ~ 7645643 (+) |
| G220645 | NA | non-coding | downstream | 1521 | 7748346 ~ 7757714 (+) |
| G220646 | NA | non-coding | downstream | 4677 | 7751502 ~ 7752595 (+) |
| G220668 | NA | non-coding | downstream | 37687 | 7784512 ~ 7785474 (+) |
| G220679 | NA | non-coding | downstream | 59896 | 7806721 ~ 7807143 (+) |
| G220680 | NA | non-coding | downstream | 60483 | 7807308 ~ 7807663 (+) |
| G220445 | LOC106575489 | other | upstream | 281614 | 7378258 ~ 7381563 (+) |
| G220435 | NA | other | upstream | 297892 | 7359668 ~ 7365285 (+) |
| LOC110508323 | LOC106575347 | other | upstream | 676655 | 6979131 ~ 6988449 (+) |
| G221299 | s10i | other | downstream | 652246 | 8399071 ~ 8489067 (+) |
| G221514 | NA | other | downstream | 982152 | 8728977 ~ 8732478 (+) |
| LOC110520796 | fam189b | other | downstream | 1014509 | 8715996 ~ 8766590 (+) |
| LOC110520836 | LOC106605888 | other | downstream | 1027222 | 8772336 ~ 8800464 (+) |
