XLOC_021824 (CR354542.1)


Basic Information

Item Value
gene id XLOC_021824
gene name CR354542.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 33759747 ~ 33760665 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043274
tagcaataaatgaatgtattttacaAACAGCACAAGTCTTACAAAATCCACTCAAACTGGAAAGCAACTGGAATTGACCAATCAACTCCAATGTTCAACATGCCCTTGAAACAATGAAAACTTTACAGGTTAGTGCCGCACACATCTAACCGTAAACTAAATGACAGAGTCTAATCCAGGGTAGGGCAAACTTGGgtttggagggctggttttaCCCACCCCTGGTGTAATCAGTAGAAAATCAATGGTTCATTCAATCCTTCAAAATCAGTCGATTCCTAGAGGGAACTAATTTTGGTTctactttaaataaaagtataaaagaataataaattgAGTACAAACTGCAATTATCAATCAATGCCGTGTAGAAAAATCATTTGGAATTCTGGCCATTTATACGTATGAAAAACGGTTATGAAGCAGAAAGACACAAAATGCCCAATCACAACAACCAAGAGTGTTTTTGCATAGAGTTTCTCTCACCATTCTGAATCCCACCAAACAGAAGCACAGTGTTCCAAACAACACAAATTGGTTATTTAAACAAACTCTTAATATCAGTAGCCACAAATTGTGCATTATATCTACTGGCTGTGGAAGTCAAACCAtgtttaaaaacagtttacaCTCGACAGAAAAATCGAATAGTCACTTCAGTCTCGAACCCTCCAAGAAATTGAGATTTTGCGCGTTCTATAACAAGCATGCAATTTCTATATACAAACAAAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093922

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043274 True 732 processed_transcript 0.36 2 33759747 33760665

Neighbor

gene id symbol gene type direction distance location
XLOC_021823 si:ch211-210c8.6 coding upstream 2005 33752275 ~ 33757742 (+)
XLOC_021822 dazap2 coding upstream 30195 33718602 ~ 33729552 (+)
XLOC_021821 CT027694.1 coding upstream 221578 33538051 ~ 33538169 (+)
XLOC_021820 NA coding upstream 300482 33455563 ~ 33459265 (+)
XLOC_021819 rapgef3 coding upstream 315692 33381154 ~ 33444055 (+)
XLOC_021825 CR381531.2 coding downstream 16854 33777519 ~ 33901337 (+)
XLOC_021826 CR381531.1 coding downstream 68000 33828665 ~ 33830190 (+)
XLOC_021827 cs coding downstream 147234 33907899 ~ 33928316 (+)
XLOC_021828 wu:fc63a07 coding downstream 173563 33934228 ~ 33953106 (+)
XLOC_021829 snrpg coding downstream 196685 33957350 ~ 33961989 (+)
XLOC_021817 dre-mir-205 non-coding upstream 469386 33290273 ~ 33290361 (+)
XLOC_021816 AL928610.1 non-coding upstream 640623 33119010 ~ 33119124 (+)
XLOC_021815 NA non-coding upstream 1180313 32577050 ~ 32579434 (+)
XLOC_021831 NA non-coding downstream 218046 33978711 ~ 33983432 (+)
XLOC_021833 AL954678.1 non-coding downstream 242092 34002757 ~ 34002873 (+)
XLOC_021837 NA non-coding downstream 1004278 34764943 ~ 34768352 (+)
XLOC_021838 CR352218.1 non-coding downstream 1089050 34849715 ~ 34987363 (+)

Expression


Co-expression Network